cmd check workflow fixes #224
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
on: | |
push: | |
branches: [main, master, dev] | |
pull_request: | |
branches: [main, master, dev] | |
name: R-CMD-check | |
jobs: | |
R-CMD-check: | |
runs-on: ${{ matrix.config.os }} | |
name: ${{ matrix.config.os }} (${{ matrix.config.r }}) ${{ matrix.config.suffix }} | |
strategy: | |
fail-fast: false | |
matrix: | |
config: | |
# running Windows and Mac with --no-examples to avoid spurious Stan crashes in examples | |
- {os: windows-latest, r: 'release', suffix: 'quick', not_cran: 'false', check_options: '"--as-cran", "--no-build-vignettes", "--ignore-vignettes", "--no-examples"'} | |
- {os: macOS-latest, r: 'release', suffix: 'quick', not_cran: 'false', check_options: '"--as-cran", "--no-build-vignettes", "--ignore-vignettes", "--no-examples"'} | |
# full checks on linux | |
- {os: ubuntu-latest, r: 'devel', suffix: '', not_cran: 'true', check_options: '"--as-cran"', rspm: "https://packagemanager.rstudio.com/cran/__linux__/bionic/latest", http-user-agent: 'release'} | |
- {os: ubuntu-latest, r: 'release', suffix: '', not_cran: 'true', check_options: '"--as-cran"', rspm: "https://packagemanager.rstudio.com/cran/__linux__/bionic/latest"} | |
# quick checks on linux | |
- {os: ubuntu-latest, r: 'release', suffix: 'quick', not_cran: 'false', check_options: '"--as-cran", "--no-build-vignettes", "--ignore-vignettes"', rspm: "https://packagemanager.rstudio.com/cran/__linux__/bionic/latest"} | |
- {os: ubuntu-latest, r: 'oldrel-1', suffix: 'quick', not_cran: 'false', check_options: '"--as-cran", "--no-build-vignettes", "--ignore-vignettes"', rspm: "https://packagemanager.rstudio.com/cran/__linux__/bionic/latest"} | |
- {os: ubuntu-latest, r: 'oldrel-2', suffix: 'quick', not_cran: 'false', check_options: '"--as-cran", "--no-build-vignettes", "--ignore-vignettes"', rspm: "https://packagemanager.rstudio.com/cran/__linux__/bionic/latest"} | |
- {os: ubuntu-latest, r: 'oldrel-3', suffix: 'quick', not_cran: 'false', check_options: '"--as-cran", "--no-build-vignettes", "--ignore-vignettes"', rspm: "https://packagemanager.rstudio.com/cran/__linux__/bionic/latest"} | |
env: | |
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
_R_CHECK_FORCE_SUGGESTS_: false | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.config.r }} | |
http-user-agent: ${{ matrix.config.http-user-agent }} | |
use-public-rspm: true | |
- name: Query dependencies | |
run: | | |
install.packages('remotes') | |
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | |
shell: Rscript {0} | |
- name: Cache R packages | |
if: runner.os != 'Windows' | |
uses: actions/cache@v1 | |
with: | |
path: ${{ env.R_LIBS_USER }} | |
key: ${{ runner.os }}-r-${{ matrix.config.r }}-1-${{ hashFiles('.github/depends.Rds') }} | |
restore-keys: ${{ runner.os }}-r-${{ matrix.config.r }}-1- | |
- name: Install system dependencies | |
if: runner.os == 'Linux' | |
env: | |
RHUB_PLATFORM: linux-x86_64-ubuntu-gcc | |
run: | | |
Rscript -e "install.packages('pak')" | |
sysreqs=$(Rscript -e "cat(tryCatch(pak::pkg_sysreqs('.', dependencies = TRUE), error = function(e) pak::pkg_sysreqs('.'))[['install_scripts']])") | |
sudo -s eval "$sysreqs" | |
- name: Install dependencies | |
run: | | |
remotes::install_deps(dependencies = TRUE) | |
remotes::install_cran("rcmdcheck") | |
shell: Rscript {0} | |
- name: Check | |
env: | |
_R_CHECK_CRAN_INCOMING_REMOTE_: false | |
NOT_CRAN: ${{ matrix.config.not_cran }} | |
run: rcmdcheck::rcmdcheck(args = c("--no-manual", ${{ matrix.config.check_options }}), error_on = "warning", check_dir = "check") | |
shell: Rscript {0} | |
- name: Upload check results | |
if: failure() | |
uses: actions/upload-artifact@v3 | |
with: | |
name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
path: check | |
- name: Test coverage | |
if: matrix.config.r == 'release' && runner.os == 'Linux' && matrix.config.suffix == 'quick' | |
run: covr::codecov() | |
shell: Rscript {0} |