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@Mayrlab

Mayrlab

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  1. tiger-seq tiger-seq Public

    Computational analysis for Horste et al., Mol. Cell, 2023

    HTML

  2. scUTRquant scUTRquant Public

    Bioinformatics pipeline for single-cell 3' UTR isoform quantification

    Python 15 4

Repositories

Showing 10 of 18 repositories
  • scUTRquant-figures Public

    Scripts used to generate figures for the scUTRquant manuscript

    Mayrlab/scUTRquant-figures’s past year of commit activity
    HTML 0 0 0 0 Updated Nov 20, 2024
  • scUTRquant Public

    Bioinformatics pipeline for single-cell 3' UTR isoform quantification

    Mayrlab/scUTRquant’s past year of commit activity
    Python 15 GPL-3.0 4 12 0 Updated Nov 20, 2024
  • txcutr-db Public

    Snakemake pipeline for generating truncated transcriptome annotations with txcutr

    Mayrlab/txcutr-db’s past year of commit activity
    Python 0 0 0 0 Updated Aug 1, 2024
  • scUTRquant-inputs Public

    Input definitions for the scUTRquant pipeline

    Mayrlab/scUTRquant-inputs’s past year of commit activity
    Python 0 0 0 0 Updated Mar 31, 2024
  • gwps-sq Public

    scUTRquant analysis of Genome-Wide Perturb-Seq dataset

    Mayrlab/gwps-sq’s past year of commit activity
    HTML 0 0 0 0 Updated Mar 29, 2024
  • atlas-hs Public Forked from Mayrlab/atlas-mm

    Merge and process multiple human 3' UTR datasets

    Mayrlab/atlas-hs’s past year of commit activity
    R 0 1 0 0 Updated Mar 29, 2024
  • atlas-mm Public

    Merge and process multiple mouse 3' UTR datasets

    Mayrlab/atlas-mm’s past year of commit activity
    R 0 1 2 0 Updated Mar 29, 2024
  • kallisto-overlap Public

    kallisto benchmarking of multi-UTR quantification for 3'-end tag-based RNA-seq

    Mayrlab/kallisto-overlap’s past year of commit activity
    HTML 0 BSD-3-Clause 0 0 0 Updated Mar 29, 2024
  • tmuris-peaks Public

    Peak Width Analysis of the Tabula Muris Libraries

    Mayrlab/tmuris-peaks’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Mar 29, 2024
  • sommerkamp20 Public

    Bioinformatics pipeline for 3'-seq data of Sommerkamp et al. 2020

    Mayrlab/sommerkamp20’s past year of commit activity
    HTML 0 0 0 0 Updated Mar 28, 2024
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