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Fix final NOTE and some misspellings
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bpbond committed Dec 16, 2024
1 parent 5618ba5 commit 0460b2f
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26 changes: 13 additions & 13 deletions R/data.R
Original file line number Diff line number Diff line change
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#' POM decomposition, and a LM for MB decay, see \link{dynamics} for more
#' details.
#'
#' @format an object created form \code{configure_model}.
#' @format An object created from \code{configure_model}.
#' \describe{
#' \item{name}{MEND}
#' \item{table}{table of the dynamics used by this model configuration, see \link{dynamics} for more details.}
#' \item{params}{data table of the model parameters, see \link{default_params} for more details.}
#' \item{state}{vector of the initial state values, see \link{default_initial} for more details.}
#' }
#' @family {configurations}
#' @family configurations
#' @references \href{https://doi.org/10.1890/12-0681.1}{Wang et al. 2013}
#' @examples
#' ## Use solve_model to run the simulation using this configuration.
Expand All @@ -66,14 +66,14 @@
#' DOM uptake, RMM for POM decomposition, and a LM for MB decay, see \link{dynamics} for more
#' details.
#'
#' @format an object created form \code{configure_model}, containing the following elements.
#' @format An object created from \code{configure_model}, containing the following elements.
#' \describe{
#' \item{name}{COMISSION}
#' \item{table}{table of the dynamics used by this model configuration, see \link{dynamics} for more details.}
#' \item{params}{data table of the model parameters, see \link{default_params} for more details.}
#' \item{state}{vector of the initial state values, see \link{default_initial} for more details.}
#' }
#' @family {configurations}
#' @family configurations
#' @references \href{https://doi.org/10.1016/j.soilbio.2015.06.008}{Ahrens et al. 2015}
#' @examples
#' ## Use solve_model to run the simulation using this configuration.
Expand All @@ -87,14 +87,14 @@
#' DOM uptake, LM for POM decomposition, and a LM for MB decay, see \link{dynamics} for more
#' details.
#'
#' @format an object created form \code{configure_model}, containing the following elements.
#' @format An object created from \code{configure_model}, containing the following elements.
#' \describe{
#' \item{name}{CORPSE}
#' \item{table}{table of the dynamics used by this model configuration, see \link{dynamics} for more details.}
#' \item{params}{data table of the model parameters, see \link{default_params} for more details.}
#' \item{state}{vector of the initial state values, see \link{default_initial} for more details.}
#' }
#' @family {configurations}
#' @family configurations
#' @references \href{https://doi.org/10.1007/s10533-018-0509-z}{Sulman et al. 2018}
#' @examples
#' ## Use solve_model to run the simulation using this configuration.
Expand All @@ -108,14 +108,14 @@
#' uptake, MM for POM decomposition, and a DD for MB decay, see \link{dynamics} for more
#' details.
#'
#' @format an object created form \code{configure_model}, containing the following elements.
#' @format An object created from \code{configure_model}, containing the following elements.
#' \describe{
#' \item{name}{MIMCS}
#' \item{table}{table of the dynamics used by this model configuration, see \link{dynamics} for more details.}
#' \item{params}{data table of the model parameters, see \link{default_params} for more details.}
#' \item{state}{vector of the initial state values, see \link{default_initial} for more details.}
#' }
#' @family {configurations}
#' @family configurations
#' @references \href{https://doi.org/10.1002/2015GB005188}{Wieder et al. 2015}
#' @examples
#' ## Use solve_model to run the simulation using this configuration.
Expand All @@ -129,14 +129,14 @@
#' uptake, LM for POM decomposition, and a LM for MB decay, see \link{dynamics} for more
#' details.
#'
#' @format an object created form \code{configure_model}, containing the following elements.
#' @format An object created from \code{configure_model}, containing the following elements.
#' \describe{
#' \item{name}{MEMS}
#' \item{table}{table of the dynamics used by this model configuration, see \link{dynamics} for more details.}
#' \item{params}{data table of the model parameters, see \link{default_params} for more details.}
#' \item{state}{vector of the initial state values, see \link{default_initial} for more details.}
#' }
#' @family {configurations}
#' @family configurations
#' @references \href{https://doi.org/10.5194/bg-16-1225-2019}{Robertson et al. 2019}
#' @examples
#' ## Use solve_model to run the simulation using this configuration.
Expand All @@ -150,14 +150,14 @@
#' uptake, MM for POM decomposition, and a LM for MB decay, see \link{dynamics} for more
#' details.
#'
#' @format an object created form \code{configure_model}, containing the following elements.
#' @format An object created from \code{configure_model}, containing the following elements.
#' \describe{
#' \item{name}{BAMS}
#' \item{table}{table of the dynamics used by this model configuration, see \link{dynamics} for more details.}
#' \item{params}{data table of the model parameters, see \link{default_params} for more details.}
#' \item{state}{vector of the initial state values, see \link{default_initial} for more details.}
#' }
#' @family {configurations}
#' @family configurations
#' @references \href{https://doi.org/10.5194/bg-16-1225-2019}{Robertson et al. 2019}
#' @examples
#' ## Use solve_model to run the simulation using this configuration.
Expand All @@ -176,7 +176,7 @@
#' \item{POMdecomp}{POM decomposition, see \link{dynamics} for more details.}
#' \item{MBdecay}{microbial biomass decay, see \link{default_initial} for more details.}
#' }
#' @family {configurations}
#' @family configurations
#' @examples
#' print(model_configs)
"model_configs"
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6 changes: 3 additions & 3 deletions man/BAMS_model.Rd

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6 changes: 3 additions & 3 deletions man/COMISSION_model.Rd

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6 changes: 3 additions & 3 deletions man/CORPSE_model.Rd

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6 changes: 3 additions & 3 deletions man/MEMS_model.Rd

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6 changes: 3 additions & 3 deletions man/MEND_model.Rd

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6 changes: 3 additions & 3 deletions man/MIMCS_model.Rd

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4 changes: 2 additions & 2 deletions man/model_configs.Rd

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