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"Other" ancestry missing from qc tables #326

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carynwillis opened this issue Sep 23, 2024 · 0 comments · Fixed by #331
Closed

"Other" ancestry missing from qc tables #326

carynwillis opened this issue Sep 23, 2024 · 0 comments · Fixed by #331
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"Other" ancestry subject level plots missing: I see that other ancestry counts were added to the table in the qc report, but it was not added back to sample_qc.csv and subject_qc.csv yet so the PCA/HWE plots were not generated for “other” ancestry when #subjects >50.
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