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exgdas_atmos_gldas.sh topodir needs / #1063

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RussTreadon-NOAA opened this issue Oct 11, 2022 · 0 comments · Fixed by #1064
Closed

exgdas_atmos_gldas.sh topodir needs / #1063

RussTreadon-NOAA opened this issue Oct 11, 2022 · 0 comments · Fixed by #1064
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@RussTreadon-NOAA
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Expected behavior
gdasgldas executable gdas2gldas should run to completion without error.

Current behavior
gdasgldas fails when executing gdas2gldas with the following error

28:  - CALL GridCreateMosaic FOR INPUT GRID
 9: NetCDF Error: /work/noaa/da/Russ.Treadon/git/global_workflow/develop/fix/orog/C96C96_grid.tile1.nc : No such file or directory
12: NetCDF Error: /work/noaa/da/Russ.Treadon/git/global_workflow/develop/fix/orog/C96C96_grid.tile1.nc : No such file or directory
13: NetCDF Error: /work/noaa/da/Russ.Treadon/git/global_workflow/develop/fix/orog/C96C96_grid.tile1.nc : No such file or directory

Machines affected
Failure detected on Orion. Same failure will likely occur on other machines.

To Reproduce
Install the g-w develop at e915eb6. Set up EXPDIR to run a parallel. Populate ROTDIR with the files needed to fully execute gdasgldas. Submit gdasgldas.

Additional Information
Notice that sorc/gldas.fd/scripts/exgdas_atmos_gldas.sh defines topodir as

export topodir=${topodir:-$HOMEgfs/fix/fix_fv3_gmted2010/$CASE/}

whereas the g-w scripts/exgdas_atmos_gldas.sh defines topodir as

export topodir=${topodir:-${HOMEgfs}/fix/orog/${CASE}}

The g-w copy drops the trailing /. The gldas copy includes the trailing /.

Possible Implementation
Add the trailing / to topodir defintion in scripts/exgdas_atmos_gldas.sh. I did this in a working copy of the develop g-w. This got my execution of gdasgldas past the gdas2gldas failure.

@RussTreadon-NOAA RussTreadon-NOAA added the bug Something isn't working label Oct 11, 2022
WalterKolczynski-NOAA added a commit to WalterKolczynski-NOAA/global-workflow that referenced this issue Oct 11, 2022
GLDAS requires the namelist definition for the topo directory to have
the trailing slash.

Fixes NOAA-EMC#1063
WalterKolczynski-NOAA added a commit that referenced this issue Oct 11, 2022
GLDAS requires the namelist definition for the topo directory to have
the trailing slash.

Fixes #1063
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