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Use the marine DA POST j-job to copy what we keep from the cycle in COMROT #1273

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guillaumevernieres opened this issue Jan 23, 2023 · 0 comments · Fixed by #1270
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Use the marine DA POST j-job to copy what we keep from the cycle in COMROT #1273

guillaumevernieres opened this issue Jan 23, 2023 · 0 comments · Fixed by #1270

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@guillaumevernieres
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guillaumevernieres commented Jan 23, 2023 •
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Description

Stop linking Data to the COMROT, instead use JGDAS_GLOBAL_OCEAN_ANALYSIS_POST to copy what we need to keep to the COMROT

See @aerorahul 's comments:

          This directory is being gutted here:

global-workflow/jobs/JGDAS_GLOBAL_OCEAN_ANALYSIS_POST

Line 21 in f98433f

[[ "${KEEPDATA}" = "NO" ]] && rm -rf "${DATA}"

I suggest the post job to copy what it needs to COM and create a working directory for this job in $DATAROOT

Originally posted by @aerorahul in #1270 (comment)
@guillaumevernieres guillaumevernieres changed the title This directory is being gutted here: Use the marine DA POST j-job to copy what we keep from the cycle in COMROT Jan 23, 2023
@guillaumevernieres guillaumevernieres mentioned this issue Jan 23, 2023
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WalterKolczynski-NOAA pushed a commit that referenced this issue Jan 25, 2023
@guillaumevernieres
More marine DA j-jobs (#1270)
f78afeb 
Addition of 2 j-jobs:
- jobs/JGDAS_GLOBAL_OCEAN_ANALYSIS_BMAT_VRFY
This job currently dumps a few files of the impulse response of B. Not meant to ever go in ops.
- jobs/JGDAS_GLOBAL_OCEAN_ANALYSIS_VRFY
This job will eventually generate relevant figures from the marine DA cycle. It currently points to a script that does not yet exist.

I also took this PR opportunity to:
- update how we load the modules, following what was done for the atmosphere.
- modify ```ush/load_ufsda_modules.sh``` so we could optionally specify what to load (GDAS or EVA), default is GDAS when no argument is present 
- Use POST to copy what's needed in `COM`

Fixes #1273
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More marine DA j-jobs guillaumevernieres/global-workflow
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