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Correct errors with gdas and monitoring symlinks #1101

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merged 3 commits into from
Oct 27, 2022
Merged

Correct errors with gdas and monitoring symlinks #1101

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2bb5645
Correct errors with gdas and monitoring symlinks
KateFriedman-NOAA Oct 27, 2022
b746e82
Address linter warnings for SC2248 in link_workflow.sh
KateFriedman-NOAA Oct 27, 2022
c3ed0c9
Small syntax update in link_workflow.sh for double quotes
KateFriedman-NOAA Oct 27, 2022
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13 changes: 8 additions & 5 deletions sorc/link_workflow.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -180,6 +180,9 @@ if [ -d "${script_dir}/gdas.cd" ]; then
[[ ! -d gdas ]] && mkdir -p gdas
cd gdas || exit 1
for gdas_sub in bump crtm fv3jedi; do
if [ -d "${gdas_sub}" ]; then
rm -rf "${gdas_sub}"
fi
fix_ver="gdas_${gdas_sub}_ver"
${LINK} "${FIX_DIR}/gdas/${gdas_sub}/${!fix_ver}" "${gdas_sub}"
done
Expand All @@ -203,7 +206,7 @@ if [ -d "${script_dir}/gsi_monitor.fd" ]; then
[[ ! -d gdas ]] && ( mkdir -p gdas || exit 1 )
cd gdas || exit 1
${LINK} "${script_dir}/gsi_monitor.fd/src/Minimization_Monitor/nwprod/gdas/fix/gdas_minmon_cost.txt" .
${LINK} "${script_dir}/gsi_monitor.fd/src/Minimization_Monitor/nwprod/gdas/fix/gdas_minmon_gnorm.txt " .
${LINK} "${script_dir}/gsi_monitor.fd/src/Minimization_Monitor/nwprod/gdas/fix/gdas_minmon_gnorm.txt" .
${LINK} "${script_dir}/gsi_monitor.fd/src/Ozone_Monitor/nwprod/gdas_oznmon/fix/gdas_oznmon_base.tar" .
${LINK} "${script_dir}/gsi_monitor.fd/src/Ozone_Monitor/nwprod/gdas_oznmon/fix/gdas_oznmon_satype.txt" .
${LINK} "${script_dir}/gsi_monitor.fd/src/Radiance_Monitor/nwprod/gdas_radmon/fix/gdas_radmon_base.tar" .
Expand Down Expand Up @@ -245,7 +248,7 @@ if [ -d "${script_dir}/gfs_wafs.fd" ]; then
wafs_awc_wafavn.x wafs_blending.x wafs_blending_0p25.x \
wafs_cnvgrib2.x wafs_gcip.x wafs_grib2_0p25.x \
wafs_makewafs.x wafs_setmissing.x; do
[[ -s ${wafsexe} ]] && rm -f ${wafsexe}
[[ -s ${wafsexe} ]] && rm -f "${wafsexe}"
${LINK} "${script_dir}/gfs_wafs.fd/exec/${wafsexe}" .
done
fi
Expand All @@ -269,7 +272,7 @@ if [ -d "${script_dir}/gsi_utils.fd" ]; then
for exe in calc_analysis.x calc_increment_ens_ncio.x calc_increment_ens.x \
getsfcensmeanp.x getsigensmeanp_smooth.x getsigensstatp.x \
interp_inc.x recentersigp.x;do
[[ -s "${exe}" ]] && rm -f ${exe}
[[ -s "${exe}" ]] && rm -f "${exe}"
${LINK} "${script_dir}/gsi_utils.fd/install/bin/${exe}" .
done
fi
Expand Down Expand Up @@ -371,7 +374,7 @@ cd "${script_dir}" || exit 8
emcsfc_ice_blend.fd \
emcsfc_snow2mdl.fd ;do
[[ -d "${prog}" ]] && rm -rf "${prog}"
${SLINK} "ufs_utils.fd/sorc/${prog}" ${prog}
${SLINK} "ufs_utils.fd/sorc/${prog}" "${prog}"
done

for prog in enkf_chgres_recenter.fd \
Expand All @@ -395,7 +398,7 @@ cd "${script_dir}" || exit 8
webtitle.fd
do
if [[ -d "${prog}" ]]; then rm -rf "${prog}"; fi
${LINK} gfs_utils.fd/src/${prog} .
${LINK} gfs_utils.fd/src/"${prog}" .
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done

if [ -d "${script_dir}/gfs_wafs.fd" ]; then
Expand Down