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Merra2 #254

Merged
merged 18 commits into from
May 19, 2021
Merged

Merra2 #254

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3bdc629
merra2 workflow for orion
AnningCheng-NOAA Dec 1, 2020
947bbad
added merra2 input and update diag_table
AnningCheng-NOAA Dec 1, 2020
79f23fa
fixed a bug related to orion
AnningCheng-NOAA Dec 1, 2020
81442ad
high resolution MERRA2 data used
AnningCheng-NOAA Dec 1, 2020
378953d
udate config.base.emc.dyn
AnningCheng-NOAA Dec 2, 2020
29bd69b
update merra2 before a new pull request
AnningCheng-NOAA Feb 2, 2021
1ea07da
testing merra2 workflow in hera
AnningCheng-NOAA Feb 9, 2021
960ca42
updated config.fcst
AnningCheng-NOAA Mar 1, 2021
0f97ccd
Merge branch 'merra2' of https://github.com/AnningCheng-NOAA/global-w…
AnningCheng-NOAA Mar 1, 2021
ac76613
Merge remote-tracking branch 'upstream/develop' into merra2
AnningCheng-NOAA Mar 8, 2021
be564bb
changes on build_fv3.sh and symlinks to optical data files instead of cp
AnningCheng-NOAA Apr 22, 2021
101905c
changed fix dir for link_fv3gfs
AnningCheng-NOAA Apr 27, 2021
587ac0c
changes added in link_fv3gfs for fix_aer
AnningCheng-NOAA Apr 28, 2021
bf5d110
fixed line 43 of link_fv3gfs.sh, build_fv3.sh v15 to v16
AnningCheng-NOAA May 3, 2021
dfc8aa9
Merge remote-tracking branch 'upstream/develop' into merra2
AnningCheng-NOAA May 12, 2021
6b57416
build_fv3.sh with ATM
AnningCheng-NOAA May 14, 2021
283c4a0
fixed a compilation error, NEMs/exe existing, in hera
AnningCheng-NOAA May 17, 2021
fa5d1e2
change fv3gfs checkout head
AnningCheng-NOAA May 18, 2021
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25 changes: 19 additions & 6 deletions parm/config/config.base.emc.dyn
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Expand Up @@ -140,7 +140,7 @@ export CASE="@CASECTL@"
export CASE_ENKF="@CASEENS@"

# Run with CCPP physics
export RUN_CCPP="NO"
export RUN_CCPP="YES"
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export CCPP_SUITE="FV3_GFS_v16beta"

# Surface cycle update frequency
Expand All @@ -165,10 +165,10 @@ export gfs_cyc=@gfs_cyc@ # 0: no GFS cycle, 1: 00Z only, 2: 00Z and 12Z only, 4:
# GFS output and frequency
export FHMIN_GFS=0

export FHMAX_GFS_00=384
export FHMAX_GFS_06=384
export FHMAX_GFS_12=384
export FHMAX_GFS_18=384
export FHMAX_GFS_00=240
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export FHMAX_GFS_06=240
export FHMAX_GFS_12=240
export FHMAX_GFS_18=240
export FHMAX_GFS=$(eval echo \${FHMAX_GFS_$cyc})

export FHOUT_GFS=3
Expand Down Expand Up @@ -222,7 +222,7 @@ export DO_GLDAS="YES"
export gldas_cyc=00

# run wave component
export DO_WAVE="YES"
export DO_WAVE="NO"
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export WAVE_CDUMP="both"

# Microphysics Options: 99-ZhaoCarr, 8-Thompson; 6-WSM6, 10-MG, 11-GFDL
Expand Down Expand Up @@ -284,5 +284,18 @@ export ARCH_WARMICFREQ=4 # Archive frequency in days for warm_start capabili
export ARCH_FCSTICFREQ=1 # Archive frequency in days for gdas and gfs forecast-only capability

export DELETE_COM_IN_ARCHIVE_JOB="YES" # NO=retain ROTDIR. YES default in arch.sh and earc.sh.
if [ $machine = "HERA" ]; then
export FIX_AER="/scratch2/NCEPDEV/climate/Anning.Cheng/MERRA2"
export FIX_LUT="/scratch2/NCEPDEV/climate/Anning.Cheng/aer_data/LUTS"
elif [ $machine = "WCOSS_C" ]; then
export FIX_AER="/gpfs/dell2/emc/modeling/noscrub/Anning.Cheng/MERRA2"
export FIX_LUT="/gpfs/dell2/emc/modeling/noscrub/Anning.Cheng/aer_data/LUTS"
elif [ $machine = "WCOSS_DELL_P3" ]; then
export FIX_AER="/gpfs/dell2/emc/modeling/noscrub/Anning.Cheng/MERRA2"
export FIX_LUT="/gpfs/dell2/emc/modeling/noscrub/Anning.Cheng/aer_data/LUTS"
elif [ $machine = "ORION" ]; then
export FIX_AER="/work/noaa/global/acheng/MERRA2"
export FIX_LUT="/work/noaa/global/acheng/aer_data/LUTS"
fi
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echo "END: config.base"
4 changes: 2 additions & 2 deletions parm/config/config.fcst
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Expand Up @@ -88,7 +88,7 @@ else
fi

# Radiation options
export IAER=5111 ;#spectral band mapping method for aerosol optical properties
export IAER=1111 ;#spectral band mapping method for aerosol optical properties
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export iovr_lw=3 ;#de-correlation length cloud overlap method (Barker, 2008)
export iovr_sw=3 ;#de-correlation length cloud overlap method (Barker, 2008)
export iovr=3 ;#de-correlation length cloud overlap method (Barker, 2008)
Expand Down Expand Up @@ -216,7 +216,7 @@ elif [[ "$CDUMP" == "gfs" ]] ; then # GFS cycle specific parameters

# Write more variables to output
if [ $QUILTING = ".true." -a $OUTPUT_GRID = "gaussian_grid" ]; then
export DIAG_TABLE="$HOMEgfs/parm/parm_fv3diag/diag_table"
export DIAG_TABLE="$HOMEgfs/parm/parm_fv3diag/diag_table_aod"
else
export DIAG_TABLE="$HOMEgfs/parm/parm_fv3diag/diag_table_orig"
fi
Expand Down
213 changes: 213 additions & 0 deletions parm/parm_fv3diag/diag_table_aod
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12 changes: 12 additions & 0 deletions scripts/exglobal_forecast.sh
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Expand Up @@ -67,6 +67,8 @@ NWPROD=${NWPROD:-${NWROOT:-$pwd}}
HOMEgfs=${HOMEgfs:-$NWPROD}
FIX_DIR=${FIX_DIR:-$HOMEgfs/fix}
FIX_AM=${FIX_AM:-$FIX_DIR/fix_am}
export FIX_AER=${FIX_AER:-$FIX_DIR/fix_aer}
export FIX_LUT=${FIX_LUT:-$FIX_DIR/fix_lut}
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FIXfv3=${FIXfv3:-$FIX_DIR/fix_fv3_gmted2010}
DATA=${DATA:-$pwd/fv3tmp$$} # temporary running directory
ROTDIR=${ROTDIR:-$pwd} # rotating archive directory
Expand Down Expand Up @@ -395,6 +397,16 @@ $NLN $FIX_AM/${H2OFORC} $DATA/global_h2oprdlos.f77
$NLN $FIX_AM/global_solarconstant_noaa_an.txt $DATA/solarconstant_noaa_an.txt
$NLN $FIX_AM/global_sfc_emissivity_idx.txt $DATA/sfc_emissivity_idx.txt

## merra2 aerosol climo
for n in 01 02 03 04 05 06 07 08 09 10 11 12; do
$NLN $FIX_AER/merra2.aerclim.2003-2014.m${n}.nc $DATA/aeroclim.m${n}.nc
done
cp -f $FIX_LUT/optics_BC.v1_3.dat $DATA/optics_BC.dat
cp -f $FIX_LUT/optics_OC.v1_3.dat $DATA/optics_OC.dat
cp -f $FIX_LUT/optics_DU.v15_3.dat $DATA/optics_DU.dat
cp -f $FIX_LUT/optics_SS.v3_3.dat $DATA/optics_SS.dat
cp -f $FIX_LUT/optics_SU.v1_3.dat $DATA/optics_SU.dat

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$NLN $FIX_AM/global_co2historicaldata_glob.txt $DATA/co2historicaldata_glob.txt
$NLN $FIX_AM/co2monthlycyc.txt $DATA/co2monthlycyc.txt
if [ $ICO2 -gt 0 ]; then
Expand Down
2 changes: 1 addition & 1 deletion sorc/build_fv3.sh
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Expand Up @@ -27,6 +27,6 @@ if [ ${RUN_CCPP:-${1:-"NO"}} = "NO" ]; then
./compile.sh "$FV3" "$target" "WW3=Y 32BIT=Y" 1
mv -f fv3_1.exe ../NEMS/exe/global_fv3gfs.x
else
./compile.sh "$target" "CCPP=Y 32BIT=Y SUITES=FV3_GFS_v15,FV3_GFS_v16beta" 2 NO NO
./compile.sh "$target" "CCPP=Y 32BIT=Y SUITES=FV3_GFS_v15,FV3_GFS_v16beta" 2 YES NO
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mv -f fv3_2.exe ../NEMS/exe/global_fv3gfs.x
fi
2 changes: 1 addition & 1 deletion sorc/checkout.sh
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Expand Up @@ -34,7 +34,7 @@ if [[ ! -d fv3gfs.fd ]] ; then
if [ ${run_ccpp:-"NO"} = "NO" ]; then
git checkout GFS.v16.0.14
else
git checkout 2e25df5fe952d27355ed58963148f46b82565469
git checkout b771e5be7e35eaea5ee7f762d644afccab019ed3
fi
git submodule update --init --recursive
cd ${topdir}
Expand Down
2 changes: 1 addition & 1 deletion ush/rocoto/workflow_utils.py
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Expand Up @@ -262,7 +262,7 @@ def get_gfs_interval(gfs_cyc):
if gfs_cyc == 0:
interval = None
if gfs_cyc == 1:
interval = '24:00:00'
interval = '120:00:00'
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elif gfs_cyc == 2:
interval = '12:00:00'
elif gfs_cyc == 4:
Expand Down