Update coupled to latest UFS version #359
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prognostic aerosols into the UFS, replacing original FV3-GOCART system. A forked repository is temporarily used to download the updated ufs-weather-model app.
app with prognostic aerosols.
with latest FV3 revision and include settings for FV3_GFS_v16 and aerosol scavenging factors.
This item is implemented as a YAML list of strings, which allows to set scavenging factors for each tracer.
removing all references to `cplgocart`.
- Copy NUOPC field dictionary to run directory by default.
ufs-weather-model with prognostic aerosols. This option is recognized by means of a hidden file created in the model's repository when running checkout.sh with option -a.
A new shell function (get_platform) is introduced to increase modularity. This fuction auto-detects the local platform and returns a string identifier. As a result, load_fv3gfs_modules.sh is refactored.
generate the FV3 namelist file for FV3-GOCART.
…ture/update-aerosols
…ture/update-aerosols
Updates the UFS model to the current tip of develop. Refs: NOAA-EMC#324
Adds the ALLOW_LANDMASK_CHANGES option to the MOM6 input templates and allows the setting via MOM6_ALLOW_LANDMASK_CHANGES (default False). Refs: NOAA-EMC#324
The newest version of CICE replaces istep0 with the normal month and day, so the namelist is updated to reflect that. ktherm and tfrz_option are updated to allow alternate settings, following similar changes to the UFS test harness. The default values are the previous settings. Settings for tr_FY, sw_redist, f_mlt_onset, and f_frx_onset are updated to new values in the UFS test harness. Additionally, many namelist options have been removed following the same deletions in the UFS test harness. Refs: NOAA-EMC#324
Some changes to the UFS require updates to the build script.
The modulefile organization has been updated to be
modulefiles/ufs_${target} rather than modulefiles/${target}/fv3, so
the module paths in the build script are updated correspondingly.
A cmake switch DAPP is now required in order to build UFS. Non-
aerosol coupled is using S2SW for the time being. This replaces
setting DS2S and DWW3 to YES.
The old v15 suite is removed from the CCPP suite list.
Refs: NOAA-EMC#324
The location of the fd_nems.yaml file changed in the UFS repository, so updated nems_configure to copy from the new location. Refs: NOAA-EMC#324
The latest version of UFS adds a setting to define the ocean mesh file, so the nems.configure templates are updated to define them. They are identical to the ice mesh file, so the MESHICE variable is renamed to MESH_OCN_ICE and used for both. Additionally, the use_mommesh variable is added and defaults to true. Refs: NOAA-EMC#324
The WW3 pre and post components now need NetCDF to build, so NetCDF is added back to the modulelist, and previously removed code in the build script is restored. Refs: NOAA-EMC#324
GitHub repository for the UFS weather model only. This repo now contains UFS-Aerosols, the aerosol component based on NASA's GOCART. Since we are using a single repository for both S2S and coupled aerosols, the -a option was removed from checkout.sh and added to build_all.sh. This option is passed to build_ufs_coupled.sh and partial_build.sh, which have been streamlined and now accept both short and long options: build_ufs_coupled.sh: -a, --aerosols -c, --coupled partial_build.sh: -a, --aerosols -c, --coupled -h, --help -v, --verbose
…d FV3 namelist parser Refs: NOAA-EMC#230
- removed CROW FirstTrue check when building config.nsst from nsst.yaml - replace nst_spinup_logic with NST_SPINUP variable that is parsed from variable dictionary - nst_spinup_logic not needed currently Refs: NOAA-EMC#230
- set NST_MODEL=2 (turns it on) - add additional NSST namelist variables: NST_SPINUP, NST_RESV, ZSEA1, ZSEA2 - set NST_SPINUP=1 (NSST will spinup) - change CCPP_SUITE from FV3_GFS_v16_coupled to FV3_GFS_v16_couplednsst Refs: NOAA-EMC#230
Adds the eps_imesh setting to the nems.configure files when CICE is on. Refs: NOAA-EMC#324, NOAA-EMC#333
The modulefile in UFS doesn't load some modules needed for the forecast script at runtime, notably produtil, which provides err_chk. The module for the forecast job is changed back to module_base for the time being. Refs: NOAA-EMC#336
WalterKolczynski-NOAA
removed
the
blocked
Updates the UFS version to the current develop. The UFS build script in g-w is changed as the bulid script in the UFS repo no longer automatically adds CCPP_FLAGS to CMAKE_FLAGS, so now the g-w version does it instead before calling the UFS script. While this change was being made, the option parsing was updated to use getopts to match other scripts. The FV3 namelist has ncld removed as that option is no longer recognized. Refs: NOAA-EMC#324
Some of the fields that had previously been turned off from output in CICE are turned back on. Refs: NOAA-EMC#324, NOAA-EMC#333
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coupled_free_forecast_wave, aerosol_firex_forecast, and aerosol_free_forecast all report as succeeded on Hera. |
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Jul 21, 2021
README is updated with instructions to build UFS for aerosols. Refs: NOAA-EMC#324, NOAA-EMC#336
JessicaMeixner-NOAA
approved these changes
Jul 21, 2021
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For the coupled side of things, this all looks fine. Approving based on the fact that @WalterKolczynski-NOAA had a successful test on hera.
kayeekayee
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May 30, 2024
Add option to use sea-ice albedo provided by the sea-ice model CICE in atmospheric radiation calculation. Add write_nsflip option. Co-authored-by: Jun.Wang <Jun.Wang@noaa.gov>
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Updates the coupled workflow to use the current version of UFS. This requires multiple updates to the configuration to handle new or changed settings.
Closes: #230, #324, #325, #333, #336, #337