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Update worker images to optimize IO performance using local data #403

Update worker images to optimize IO performance using local data

Update worker images to optimize IO performance using local data #403

# Test changes that have been pushed to the master and dev branches
name: Intergration Tests
# Controls when the action will run.
on:
push:
branches: [ master, dev ]
pull_request:
branches: [ master, dev ]
# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
# Run unit tests on Python
integration_test_latest:
# The type of runner that the job will run on
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ['3.8', '3.9', '3.10', '3.11']
# Service containers to run with `runner-job`
services:
# Label used to access the service container
redis:
# Docker Hub image
image: bitnami/redis
# Set health checks to wait until redis has started
options: >-
--health-cmd "redis-cli ping"
--health-interval 10s
--health-timeout 5s
--health-retries 5
-e REDIS_PASSWORD="DPXzqRqjhsXokOVQcPUqOJuzKePMsfUc"
ports:
# Maps port 6379 on service container to the host
- 19639:6379
minio:
image: bitnami/minio:2022.10.8
ports:
- 9000:9000
- 9001:9001
options: >-
-e MINIO_ROOT_USER="dmod"
-e MINIO_ROOT_PASSWORD="password"
-e MINIO_SERVER_ACCESS_KEY="dmod"
-e MINIO_SERVER_SECRET_KEY="password"
# Steps represent a sequence of tasks that will be executed as part of the job
steps:
# Checks-out repository under $GITHUB_WORKSPACE, so your job can access it
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Cache Python Venv
id: cache-python-venv
uses: actions/cache@v1
with:
path: dmod_venv
key: dmod-venv-dir-${{ hashFiles('python/**/_version.py', '**/requirements*.txt') }}
- name: Init Python Venv
if: steps.cache-python-venv.outputs.cache-hit != 'true'
run: |
python3 -m venv dmod_venv
. dmod_venv/bin/activate
pip install --upgrade pip
deactivate
export PROJECT_ROOT=$(pwd)
echo ${PROJECT_ROOT}
./scripts/update_package.sh --venv dmod_venv --dependencies
- name: Cache Package Checksums
id: cache-packages-md5
uses: actions/cache@v1
with:
path: package_md5s
key: package_md5s-${{ hashFiles('python/**/*') }}
- name: Update Individual Packages
id: update-individual-packages
run: |
[ ! -d package_md5s ] && mkdir package_md5s
set -e
for p in `./scripts/run_tests.sh --list-packages --service-packages --quiet`; do
_P_SIMPLE_NAME="`basename ${p}`"
_P_MD5_FILE="package_md5s/${_P_SIMPLE_NAME}.md5"
_P_EXPECTED_MD5="`find ${p} -type f -exec md5sum {} \; | sort -k 2 | md5sum`"
if [ -e ${p}/pyproject.toml ]; then
if [ '${{ steps.cache-python-venv.outputs.cache-hit }}' = 'true' ]; then
if [ -e ${_P_MD5_FILE} ]; then
if [ "`cat ${_P_MD5_FILE}`" = "${_P_EXPECTED_MD5}" ]; then
echo "Package checksum file '${_P_MD5_FILE}' matches expected"
else
echo "Package checksum file '${_P_MD5_FILE}' contents do not match; updating"
./scripts/update_package.sh --venv dmod_venv ${p}
fi
else
echo "Creating package checksum file '${_P_MD5_FILE}'"
echo "${_P_EXPECTED_MD5}" > ${_P_MD5_FILE}
fi
else
echo "Creating package checksum file '${_P_MD5_FILE}'"
echo "${_P_EXPECTED_MD5}" > ${_P_MD5_FILE}
fi
fi
done
set +e
- name: Cache SSL Setup
id: cache-ssl-setup
uses: actions/cache@v1
with:
path: ssl
key: dmod-ssl-setup
# Set up the SSL directory
- name: Setup SSL
if: steps.cache-ssl-setup.outputs.cache-hit != 'true'
run: |
mkdir ssl
mkdir ssl/local
mkdir ssl/requestservice
mkdir ssl/requests
mkdir ssl/scheduler
./scripts/gen_cert.sh -d ssl/local -email dmod_gh_action@fake.gov
cp -a ssl/local/*.pem ssl/requestservice/.
cp -a ssl/local/*.pem ssl/requests/.
cp -a ssl/local/*.pem ssl/scheduler/.
- name: Echo dependency versions
run: |
. dmod_venv/bin/activate
python3 -m pip freeze
deactivate
timeout-minutes: 1
- name: Run Tests
run: |
. dmod_venv/bin/activate
python3 -m pip install pytest
python3 -m pytest -o python_files="it_*.py" -o env_vars='IT_REDIS_CONTAINER_PASS="DPXzqRqjhsXokOVQcPUqOJuzKePMsfUc" IT_REDIS_CONTAINER_HOST_PORT=19639 MODEL_EXEC_ACCESS_KEY=dmod MODEL_EXEC_SECRET_KEY=password'