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Fix #1438 - optionally gather fields after ingest exception #12438

Fix #1438 - optionally gather fields after ingest exception

Fix #1438 - optionally gather fields after ingest exception #12438

Workflow file for this run

name: Tests
on:
push:
paths-ignore: ['*.md', 'CODEOWNERS', 'LICENSE']
branches:
- 'integration'
- 'release/version*'
pull_request:
paths-ignore: ['*.md', 'CODEOWNERS', 'LICENSE', '.github/workflows/microservice*.yaml']
workflow_dispatch:
env:
JAVA_VERSION: '11'
JAVA_DISTRIBUTION: 'zulu' #This is the default on v1 of the action for 1.8
MAVEN_OPTS: "-Djansi.force=true -Dhttps.protocols=TLSv1.2 -Dorg.slf4j.simpleLogger.log.org.apache.maven.cli.transfer.Slf4jMavenTransferListener=WARN -Djava.awt.headless=true -XX:ThreadStackSize=1m"
jobs:
# Runs the pom sorter and code formatter to ensure that the code
# is formatted and poms are sorted according to project rules. If changes are found,
# they are committed back to the branch
check-code-formatting:
runs-on: ubuntu-latest
steps:
- name: Checkout Code
uses: actions/checkout@v4
- name: Set up JDK ${{env.JAVA_VERSION}}
uses: actions/setup-java@v4
with:
distribution: ${{env.JAVA_DISTRIBUTION}}
java-version: ${{env.JAVA_VERSION}}
maven-version: 3.9.5
cache: 'maven'
- name: Extract branch name
shell: bash
run: echo "branch=${GITHUB_HEAD_REF:-${GITHUB_REF#refs/heads/}}" >> $GITHUB_OUTPUT
id: extract_branch
- name: Format code
env:
USER_NAME: ${{ secrets.USER_NAME }}
ACCESS_TOKEN: ${{ secrets.ACCESS_TOKEN }}
run: |
mvn -s $GITHUB_WORKSPACE/.github/workflows/settings.xml -V -B -e -ntp "-Dstyle.color=always" clean formatter:format sortpom:sort impsort:sort -Dmaven.build.cache.enabled=false -Pautoformat
git status
git diff-index --quiet HEAD || (echo "Modified files found. Creating new commit with formatting fixes" && echo "diffs_found=true" >> "$GITHUB_ENV")
- name: Commit Changes
run: |
if [ "$diffs_found" = true ]; then
git config --global user.name "GitHub Actions"
git config --global user.email "datawave@github.com"
git pull origin ${{ steps.extract_branch.outputs.branch }} --rebase --autostash
git checkout -b ${{ steps.extract_branch.outputs.branch }}
git commit -am "GitHub Actions: Fix Formatting"
git push origin ${{ steps.extract_branch.outputs.branch }}
else
echo "Nothing to do"
fi
# Build the code and run the unit/integration tests.
build-and-test:
runs-on: ubuntu-latest
steps:
- name: Checkout Code
uses: actions/checkout@v4
- name: Set up JDK ${{env.JAVA_VERSION}}
uses: actions/setup-java@v4
with:
distribution: ${{env.JAVA_DISTRIBUTION}}
java-version: ${{env.JAVA_VERSION}}
maven-version: 3.9.5
cache: 'maven'
- name: Build and Run Unit Tests
env:
USER_NAME: ${{ secrets.USER_NAME }}
ACCESS_TOKEN: ${{ secrets.ACCESS_TOKEN }}
run: |
RUN_TESTS="mvn -s $GITHUB_WORKSPACE/.github/workflows/settings.xml -V -B -e -ntp "-Dstyle.color=always" -Pdev,examples,assemble,spotbugs -Dmaven.build.cache.enabled=false -Ddeploy -Ddist -T1C clean verify"
$RUN_TESTS \
|| { echo "***** TESTS FAILED. Attempting retry."; $RUN_TESTS; } \
|| { echo "***** TESTS FAILED. Attempting final retry."; $RUN_TESTS; }
# This step can be uncommented to support feature development. When developing a
# feature which spans multiple repos, you can update the poms to use the latest
# SNAPSHOT across the board, and run this action as a sanity check to ensure
# everything is working in unison.
# # Build the code and run the microservice unit/integration tests.
# build-and-test-microservices:
# runs-on: ubuntu-latest
# steps:
# - name: Checkout Code
# uses: actions/checkout@v4
# with:
# submodules: 'recursive'
# - name: Set up JDK ${{env.JAVA_VERSION}}
# uses: actions/setup-java@v4
# with:
# distribution: ${{env.JAVA_DISTRIBUTION}}
# java-version: ${{env.JAVA_VERSION}}
# - uses: actions/cache@v4
# with:
# path: ~/.m2/repository
# key: ${{ runner.os }}-maven-build-${{ hashFiles('**/pom.xml') }}
# restore-keys: |
# ${{ runner.os }}-maven-build-
# ${{ runner.os }}-maven-format-
# ${{ runner.os }}-maven-
# - name: Build Project
# env:
# USER_NAME: ${{ secrets.USER_NAME }}
# ACCESS_TOKEN: ${{ secrets.ACCESS_TOKEN }}
# run: |
# BUILD="mvn -s $GITHUB_WORKSPACE/.github/workflows/settings.xml -V -B -e -Pdev,examples,assemble,spotbugs -Dmaven.build.cache.enabled=false -DskipServices -Ddeploy -Ddist -T1C -pl "-:config-service" clean install -DskipTests"
# $BUILD
# - name: Run Microservice Unit Tests
# env:
# USER_NAME: ${{ secrets.USER_NAME }}
# ACCESS_TOKEN: ${{ secrets.ACCESS_TOKEN }}
# run: |
# RUN_TESTS="mvn -s $GITHUB_WORKSPACE/.github/workflows/settings.xml -V -B -e -Dmaven.build.cache.enabled=false verify"
# cd microservices
# $RUN_TESTS \
# || { echo "***** TESTS FAILED. Attempting retry."; $RUN_TESTS; } \
# || { echo "***** TESTS FAILED. Attempting final retry."; $RUN_TESTS; }
quickstart-build-and-test:
runs-on: ubuntu-latest
steps:
- name: Checkout Code
uses: actions/checkout@v4
- name: Set up JDK ${{env.JAVA_VERSION}}
uses: actions/setup-java@v4
with:
distribution: ${{env.JAVA_DISTRIBUTION}}
java-version: ${{env.JAVA_VERSION}}
maven-version: 3.9.5
cache: 'maven'
# Allow us to use the "--squash" option below
- name: Turn on Docker experimental features and move Docker data root
run: |
if [[ -f /etc/docker/daemon.json ]]; then
sudo sed -ri 's|\s*}\s*$|, "experimental": true, "data-root": "/mnt/docker" }|' /etc/docker/daemon.json
else
echo $'{\n "experimental": true, "data-root": "/mnt/docker"\n}' | sudo tee /etc/docker/daemon.json
fi
sudo systemctl restart docker
echo Docker Experimental Features: $(docker version -f '{{.Server.Experimental}}')
# Builds the quickstart docker image and run the query tests
- name: Quickstart Query Tests
env:
DW_DATAWAVE_BUILD_COMMAND: "mvn -s $GITHUB_WORKSPACE/.github/workflows/settings.xml -B -V -e -ntp -Dstyle.color=always -Dmaven.build.cache.enabled=false -Pdev -Ddeploy -Dtar -DskipTests clean package"
DOCKER_BUILD_OPTS: "--squash --force-rm"
USER_NAME: ${{ secrets.USER_NAME }}
ACCESS_TOKEN: ${{ secrets.ACCESS_TOKEN }}
run: |
TAG=$(mvn -s $GITHUB_WORKSPACE/.github/workflows/settings.xml -q -N -Dmaven.build.cache.enabled=false -Dexec.executable='echo' -Dexec.args='${project.version}' exec:exec)
contrib/datawave-quickstart/docker/docker-build.sh ${TAG} --docker-opts "${DOCKER_BUILD_OPTS}"
compose-build-and-test-latest-snapshots:
runs-on: ubuntu-latest
steps:
- name: Free up some space
run: |
sudo rm -rf /usr/share/dotnet
sudo rm -rf /opt/ghc
sudo rm -rf /usr/local/share/boost
sudo rm -rf $AGENT_TOOLSDIRECTORY
- name: Checkout Code
uses: actions/checkout@v4
with:
submodules: 'recursive'
- name: Set up JDK ${{env.JAVA_VERSION}}
uses: actions/setup-java@v4
with:
distribution: ${{env.JAVA_DISTRIBUTION}}
java-version: ${{env.JAVA_VERSION}}
maven-version: 3.9.5
cache: 'maven'
# Builds the quickstart and microservice docker images and runs a query test
- name: Docker Compose Query Tests
env:
USER_NAME: ${{ secrets.USER_NAME }}
ACCESS_TOKEN: ${{ secrets.ACCESS_TOKEN }}
run: |
# update datawave dependencies to use the latest snapshots
mvn -s $GITHUB_WORKSPACE/.github/workflows/settings.xml -B -V -e versions:update-properties versions:update-parent -DallowSnapshots=true -Dincludes=gov.nsa.*
mvn -s $GITHUB_WORKSPACE/.github/workflows/settings.xml -B -V -e -Pcompose -Dmicroservice-docker -Dquickstart-docker -Ddeploy -Dtar -DskipTests clean install
# free up some space so that we don't run out
docker system prune -f
mvn -s $GITHUB_WORKSPACE/.github/workflows/settings.xml -B -V -e -Pcompose -Dmicroservice-docker -Dquickstart-docker -Ddeploy -Dtar -DskipTests clean
cd docker
./bootstrap.sh
attempt=0
max_attempts=20
while [ $attempt -lt $max_attempts ]; do
attempt=$((attempt+1))
echo "Starting docker compose (Attempt ${attempt}/${max_attempts})"
nohup docker compose up -d --no-recreate < /dev/null > compose.out 2>&1 &
sleep 60s
cat compose.out
# check to see if the query service is running
QUERY="$(docker compose ps --status running --services | grep query || true)"
if [ "$QUERY" == "query" ] ; then
echo "Docker compose started successfully"
break
elif [ $attempt -eq $max_attempts ] ; then
echo "Failed to start docker compose"
exit 1
fi
done
cd scripts
./testAll.sh
- name: Dump Logs
if: failure()
run: |
cd docker
docker compose logs
compose-build-and-test:
runs-on: ubuntu-latest
steps:
- name: Free up some space
run: |
sudo rm -rf /usr/share/dotnet
sudo rm -rf /opt/ghc
sudo rm -rf /usr/local/share/boost
sudo rm -rf $AGENT_TOOLSDIRECTORY
- name: Checkout Code
uses: actions/checkout@v4
with:
submodules: 'recursive'
- name: Set up JDK ${{env.JAVA_VERSION}}
uses: actions/setup-java@v4
with:
distribution: ${{env.JAVA_DISTRIBUTION}}
java-version: ${{env.JAVA_VERSION}}
- uses: actions/cache@v4
with:
path: ~/.m2/repository
key: ${{ runner.os }}-maven-build-${{ hashFiles('**/pom.xml') }}
restore-keys: |
${{ runner.os }}-maven-build-
${{ runner.os }}-maven-format-
${{ runner.os }}-maven-
# Builds the quickstart and microservice docker images and runs a query test
- name: Docker Compose Query Tests
env:
USER_NAME: ${{ secrets.USER_NAME }}
ACCESS_TOKEN: ${{ secrets.ACCESS_TOKEN }}
run: |
# set some bogus URLs to trigger dependency download via maven
DIST_URLS="-Durl.zookeeper=https://bogus.apache.org/zookeeper/zookeeper-3.7.2/apache-zookeeper-3.7.2-bin.tar.gz.tar.gz \
-Durl.accumulo=https://bogus.apache.org/accumulo/2.1.3/accumulo-2.1.3-bin.tar.gz \
-Durl.wildfly=https://bogus.jboss.org/wildfly/17.0.1.Final/wildfly-17.0.1.Final.tar.gz \
-Durl.hadoop=https://bogus.apache.org/hadoop/common/hadoop-3.3.6/hadoop-3.3.6.tar.gz \
-Durl.maven=https://bogus.apache.org/maven/maven-3/3.8.8/binaries/apache-maven-3.8.8-bin.tar.gz"
mvn -s $GITHUB_WORKSPACE/.github/workflows/settings.xml -B -V -e -Pcompose -Dmicroservice-docker -Dquickstart-docker -Dquickstart-maven ${DIST_URLS} -Ddeploy -Dtar -DskipTests -Dmaven.build.cache.enabled=false clean install
# free up some space so that we don't run out
docker system prune -f
mvn -s $GITHUB_WORKSPACE/.github/workflows/settings.xml -B -V -e -Pcompose -Dmicroservice-docker -Dquickstart-docker -Dquickstart-maven ${DIST_URLS} -Ddeploy -Dtar -DskipTests -Dmaven.build.cache.enabled=false clean
cd docker
./bootstrap.sh
attempt=0
max_attempts=20
while [ $attempt -lt $max_attempts ]; do
attempt=$((attempt+1))
echo "Starting docker compose (Attempt ${attempt}/${max_attempts})"
nohup docker compose up -d --no-recreate < /dev/null > compose.out 2>&1 &
sleep 60s
cat compose.out
# check to see if the query service is running
QUERY="$(docker compose ps --status running --services | grep query || true)"
if [ "$QUERY" == "query" ] ; then
echo "Docker compose started successfully"
break
elif [ $attempt -eq $max_attempts ] ; then
echo "Failed to start docker compose"
exit 1
fi
done
cd scripts
./testAll.sh
- name: Dump Logs
if: failure()
run: |
cd docker
docker compose logs
# Here's an example of how you'd deploy the image to the github package registry.
# We don't want to do this by default since packages on github cannot be deleted
# or overwritten. So this could only be done for tags, however it seems the quickstart
# image may also exceed the maximum size allowed by github.
# - name: Deploy Quickstart Image
# env:
# IMAGE_REGISTRY: "docker.pkg.github.com"
# IMAGE_USERNAME: "brianloss"
# IMAGE_NAME: "datawave/quickstart"
# USER_NAME: ${{ secrets.USER_NAME }}
# ACCESS_TOKEN: ${{ secrets.ACCESS_TOKEN }}
# run: |
# # Set up env vars
# TAG=$(mvn -s $GITHUB_WORKSPACE/.github/workflows/settings.xml -q -N -Dmaven.build.cache.enabled=false -Dexec.executable='echo' -Dexec.args='${project.version}' exec:exec)
# REMOTE_IMAGE_NAME="${IMAGE_REGISTRY}/${IMAGE_USERNAME}/${IMAGE_NAME}"
# # Log in to the package registry
# echo ${{ secrets.GITHUB_TOKEN }} | docker login docker.pkg.github.com --username ${GITHUB_ACTOR} --password-stdin
# # Tag and push the image
# docker tag ${IMAGE_NAME}:${TAG} ${REMOTE_IMAGE_NAME}:${TAG}
# docker images
# docker push ${REMOTE_IMAGE_NAME}:${TAG}