Check for new model inference #10

	name: Check for new model inference

	on:
	push:
	paths:
	- "//*.onnx"
	workflow_dispatch:

	permissions:
	contents: write
	pull-requests: write

	jobs:
	select-runner:
	runs-on: ubuntu-22.04
	outputs:
	runner: ${{ steps.select_runner.outputs.runner }}
	steps:
	- uses: actions/checkout@v3
	- name: Select runner
	id: select_runner
	run: \|
	if [ "${{ github.repository }}" = "NeuroDesk/cvpr-sam-on-laptop-2024" ]; then
	echo "runner=self-hosted" >> $GITHUB_OUTPUT
	else
	echo "runner=ubuntu-22.04" >> $GITHUB_OUTPUT
	fi

	infer_new_model:
	needs: [select-runner]
	runs-on: ${{ needs.select-runner.outputs.runner }}
	steps:
	- uses: actions/checkout@v3

	- name: Set up environment and data from osf
	env:
	OSF_TOKEN: ${{ secrets.OSF_TOKEN }}
	run: \|
	sudo apt-get update
	sudo apt-get install python3.10 python3.10-venv python-is-python3 -y
	pip install osfclient
	pip install torch torchvision torchaudio --index-url https://download.pytorch.org/whl/cpu
	pip install -e .

	osf --project u8tny fetch test_demo.zip
	unzip test_demo.zip
	rm test_demo.zip
	tree .

	- name: Run inference
	shell: bash
	run: \|
	python CVPR24_LiteMedSamOnnx_infer.py -i imgs/ -o segs

	- name: Evaluate accuracy and efficiency
	run: \|
	python evaluation/compute_metrics.py -s segs -g gts -csv_dir ./metrics.csv

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