installation error on mac: polygon edge not found

[angelesdecara]

Hi,

I'm on a Mac Sierra (10.12.6) and cannot install PCAviz. I've followed the steps, but

Quitting from lines 60-61 (iris.Rmd)
Error: processing vignette 'iris.Rmd' failed with diagnostics:
polygon edge not found
Execution halted
Installation failed: Command failed (1)

All help will be greatly appreciated!

[pcarbo]

@angelesdecara Thanks for your interest in

Does it work when you install without the vignettes?

devtools::install_github("NovembreLab/PCAviz",build_vignettes = FALSE)

Can you please send the output of running sessionInfo?

sessionInfo()

[angelesdecara]

Dear Peter, It does install with build_vignettes=FALSE. Please find attached the output of sessionInfo Thanks a lot!

On Tue, 11 Sep 2018 at 16:56, Peter Carbonetto ***@***.***> wrote: @angelesdecara <https://github.com/angelesdecara> Thanks for your interest in Does it work when you install without the vignettes? devtools::install_github("NovembreLab/PCAviz",build_vignettes = FALSE) Can you please send the output of running sessionInfo? sessionInfo() — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#4 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AK4v9TUt7aHyWd4eMbLzaNaYDk7eFm53ks5uZ88cgaJpZM4WjM-f> .

R version 3.4.1 (2017-06-30) Platform: x86_64-apple-darwin16.7.0 (64-bit) Running under: macOS Sierra 10.12.6 Matrix products: default BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib LAPACK: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib locale: [1] C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] PCAviz_0.3-29 loaded via a namespace (and not attached): [1] Rcpp_0.12.18 pillar_1.3.0 compiler_3.4.1 git2r_0.23.0 [5] plyr_1.8.4 bindr_0.1.1 tools_3.4.1 digest_0.6.16 [9] viridisLite_0.3.0 jsonlite_1.5 memoise_1.1.0 tibble_1.4.2 [13] gtable_0.2.0 pkgconfig_2.0.2 rlang_0.2.2 curl_3.2 [17] bindrcpp_0.2.2 withr_2.1.2 dplyr_0.7.6 httr_1.3.1 [21] knitr_1.20 htmlwidgets_1.2 devtools_1.13.6 maps_3.3.0 [25] grid_3.4.1 tidyselect_0.2.4 cowplot_0.9.3 glue_1.3.0 [29] data.table_1.11.4 R6_2.2.2 plotly_4.8.0 tidyr_0.8.1 [33] ggplot2_3.0.0 purrr_0.2.5 magrittr_1.5 scales_1.0.0 [37] htmltools_0.3.6 assertthat_0.2.0 countrycode_1.00.0 colorspace_1.3-2 [41] lazyeval_0.2.1 munsell_0.5.0 crayon_1.3.4

[pcarbo]

@angelesdecara Thanks for the feedback. Unfortunately, I cannot reproduce the error. If you cloen or download this repository, you should find the rendered vignettes in the docs folder, which you can browse locally on your computer. (We will soon have these vignettes up on a website so that you don't need to download the whole thing.)