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OndrejSladky committed Jul 7, 2024
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# FMSI ($f$-Masked Superstring Index)

[![FMSI test](https://github.com/OndrejSladky/fmsi/actions/workflows/ci.yml/badge.svg)](https://github.com/OndrejSladky/fmsi/actions/)

FMSI is a memory-efficient tool for querying $k$-mer sets and performing set operations on them.
Internally it implements the FMS-index - a BWT based index for $f$-masked superstrings.

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