set default compression level to 6

OpenGene · May 4, 2018 · 5aade51 · 5aade51
1 parent 52bf66f
commit 5aade51
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/src/main.cpp b/src/main.cpp
@@ -27,7 +27,7 @@ int main(int argc, char* argv[]){
     cmd.add<string>("out_folder", 'o', "output folder, default is current working directory", false, ".");
     cmd.add<string>("suffix1", 'f', "the suffix to be appended to the output file name given in sample sheet, default is none", false, "");
     cmd.add<string>("undetermined", 'u', "the file name of undetermined data, default is Undetermined", false, "Undetermined");
-    cmd.add<int>("compression", 'z', "compression level for gzip output (1 ~ 9). 1 is fastest, 9 is smallest, default is 2.", false, 2);
+    cmd.add<int>("compression", 'z', "compression level for gzip output (1 ~ 9). 1 is fastest, 9 is smallest, default is 6.", false, 6);
 
     cmd.parse_check(argc, argv);
 

diff --git a/src/options.cpp b/src/options.cpp
@@ -7,7 +7,7 @@
 
 Options::Options(){
     in1 = "";
-    compression = 2;
+    compression = 6;
     umdeterminedFileName = "Undetermined";
 }