docker: prevent manual pin of dependencies and improve build speed #95

…yter lab v3 anymore, causing us build problems now

…ance

…e solver

…avoid too big dependency resolution

…ot found

Encountered problems while solving: - package vcs-8.1-py_0 requires vtk-cdat >8.1, but none of the providers can be installed

This reverts commit 498bc8c. vtk-cdat was already part of cdat repo.

…estigate later

…mba update

… if it prevent the downgrade

…try to pin in environment.yml as well

…ate hardcode pin in Dockerfile

…d anymore

…f the downgrade

…r downgrade, restore it since it did help conda perf, restore hardcode pin in environment.yml to avoid downgrade

…terlab-manager with jupyterlab v3 Build error: ``` Node v15.14.0 Yarn configuration loaded. > /opt/conda/envs/birdy/bin/npm pack @jupyter-widgets/jupyterlab-manager npm notice npm notice 📦 @jupyter-widgets/jupyterlab-manager@3.0.1 npm notice === Tarball Contents === npm notice 14.5kB LICENSE npm notice 2.8kB README.md npm notice 277B lib/index.d.ts npm notice 380B lib/index.js npm notice 5.9kB lib/manager.d.ts npm notice 15.3kB lib/manager.js npm notice 1.9kB lib/output.d.ts npm notice 5.3kB lib/output.js npm notice 828B lib/plugin.d.ts npm notice 7.9kB lib/plugin.js npm notice 960B lib/renderer.d.ts npm notice 3.3kB lib/renderer.js npm notice 216B lib/semvercache.d.ts npm notice 862B lib/semvercache.js npm notice 3.3kB package.json npm notice 375B schema/plugin.json npm notice === Tarball Details === npm notice name: @jupyter-widgets/jupyterlab-manager npm notice version: 3.0.1 npm notice filename: @jupyter-widgets/jupyterlab-manager-3.0.1.tgz npm notice package size: 15.6 kB npm notice unpacked size: 64.0 kB npm notice shasum: ba70c14282fb8bd3c6560588f4c7b90b2b2b05fb npm notice integrity: sha512-yhmakhiAFtKtZ[...]RptG4BvNdS+HA== npm notice total files: 16 npm notice jupyter-widgets-jupyterlab-manager-3.0.1.tgz npm notice npm notice New major version of npm available! 7.7.6 -> 8.3.0 npm notice Changelog: <https://github.com/npm/cli/releases/tag/v8.3.0> npm notice Run `npm install -g npm@8.3.0` to update! npm notice Node v15.14.0 Yarn configuration loaded. Building jupyterlab assets (production, minimized) > node /opt/conda/envs/birdy/lib/python3.9/site-packages/jupyterlab/staging/yarn.js install --non-interactive yarn install v1.21.1 [1/5] Validating package.json... [2/5] Resolving packages... [3/5] Fetching packages... warning @blueprintjs/core@3.52.0: Invalid bin entry for "upgrade-blueprint-2.0.0-rename" (in "@blueprintjs/core"). warning @blueprintjs/core@3.52.0: Invalid bin entry for "upgrade-blueprint-3.0.0-rename" (in "@blueprintjs/core"). error @npmcli/fs@1.1.0: The engine "node" is incompatible with this module. Expected version "^12.13.0 || ^14.15.0 || >=16". Got "15.14.0" error Found incompatible module. info Visit https://yarnpkg.com/en/docs/cli/install for documentation about this command. npm dependencies failed to install Traceback (most recent call last): File "/opt/conda/envs/birdy/lib/python3.9/site-packages/jupyterlab/debuglog.py", line 48, in debug_logging yield File "/opt/conda/envs/birdy/lib/python3.9/site-packages/jupyterlab/labextensions.py", line 140, in start build(clean_staging=self.should_clean, File "/opt/conda/envs/birdy/lib/python3.9/site-packages/jupyterlab/commands.py", line 482, in build return handler.build(name=name, version=version, static_url=static_url, File "/opt/conda/envs/birdy/lib/python3.9/site-packages/jupyterlab/commands.py", line 688, in build raise RuntimeError(msg) RuntimeError: npm dependencies failed to install Exiting application: lab ```

Build error with the old way: ``` Node v15.14.0 Yarn configuration loaded. > /opt/conda/envs/birdy/bin/npm pack jupyter-leaflet npm notice npm notice 📦 jupyter-leaflet@0.15.0 npm notice === Tarball Contents === npm notice 356B README.md npm notice 382B .eslintrc.json npm notice 692B dist/0b50583aa1b8ff230b57b92263e47a3e.png npm notice 165.5kB dist/0f2c10250081cf1bd9a4d2250b80dba6.png npm notice 1.3kB dist/4f0283c6ce28e888000e978e537a6a56.png npm notice 3.6kB dist/6a1e950d14904d4b6fb5c9bdc3dfad06.png npm notice 762B dist/6e8e462555c4b10dbfbc206e8276e6e2.png npm notice 491B dist/07f16cd155661436fe27959eab15c820.png npm notice 535B dist/9e9c77db241e8a58da99bf28694c907d.png npm notice 462B dist/35ae4b5f1bf198c6d955618b85710d05.png npm notice 618B dist/44a526eed258222515aa21eaffd14a96.png npm notice 387B dist/056dcd0b0dea7c78019243311551d64b.png npm notice 150B dist/69fbc9c24b3665b801445c9bccc7017d.png npm notice 2.5kB dist/401d815dc206b8dc1b17cd0e37695975.png npm notice 420B dist/473ee081160a469c95199d70e78f55fa.png npm notice 3.8kB dist/549b33bab7247b619c0292995f5a906b.png npm notice 277B dist/592b7360116d244f9dd932b0c0041982.png npm notice 279B dist/994ef255f2077b24b0d8975e90e37a33.png npm notice 1.5kB dist/2273e3d8ad9264b7daa5bdbf8e6b47f8.png npm notice 192B dist/7910c667cb5ddcdcb4ee3278627c85e1.png npm notice 57.0kB dist/79148a43587cbe5c43d24fa894a78ba3.png npm notice 696B dist/a6137456ed160d7606981aa57c559898.png npm notice 397B dist/cfe6f6ffc5b2d6c482c36c68522f0282.png npm notice 1.5kB dist/d3a5d64a8534322988a4bed1b7dbc8b0.png npm notice 299B dist/ddb8362e333c8f3225da9d578d00c14c.png npm notice 1.9kB dist/deac1d4aa2ccf7ed832e4db55bb64e63.png npm notice 1.0kB dist/e81afdf0b23bc88ea3e6ef3fc2fb65d6.png npm notice 326B dist/f4b0c949877c5f94158208551a57e29d.png npm notice 1.8kB dist/f9b7a75b186911a1b04d08f8db305b7a.gif npm notice 460B dist/fd48ced8485c638cadcea3eaab6d0937.png npm notice 5.6kB dist/fd5728f2cf777b06b966d05c0c823dc9.svg npm notice 844.1kB dist/index.js npm notice 1.1kB dist/index.js.LICENSE.txt npm notice 3.3MB dist/index.js.map npm notice 2.0kB package.json npm notice 706B src/controls/AttributionControl.js npm notice 1.2kB src/controls/Control.js npm notice 5.5kB src/controls/DrawControl.js npm notice 701B src/controls/FullScreenControl.js npm notice 1.9kB src/controls/LayersControl.js npm notice 2.1kB src/controls/LegendControl.js npm notice 1.9kB src/controls/MeasureControl.js npm notice 677B src/controls/ScaleControl.js npm notice 2.2kB src/controls/SearchControl.js npm notice 1.7kB src/controls/SplitMapControl.js npm notice 3.5kB src/controls/WidgetControl.js npm notice 788B src/controls/ZoomControl.js npm notice 144B src/embed.js npm notice 398B src/extension.js npm notice 565B src/index.js npm notice 4.9kB src/jupyter-leaflet.css npm notice 2.5kB src/jupyter-leaflet.js npm notice 501B src/jupyterlab-plugin.js npm notice 1.5kB src/layers/AntPath.js npm notice 832B src/layers/AwesomeIcon.js npm notice 872B src/layers/Circle.js npm notice 862B src/layers/CircleMarker.js npm notice 649B src/layers/DivIcon.js npm notice 566B src/layers/FeatureGroup.js npm notice 2.1kB src/layers/GeoJSON.js npm notice 1.1kB src/layers/Heatmap.js npm notice 688B src/layers/Icon.js npm notice 1.2kB src/layers/ImageOverlay.js npm notice 4.7kB src/layers/Layer.js npm notice 1.4kB src/layers/LayerGroup.js npm notice 621B src/layers/LocalTileLayer.js npm notice 1.9kB src/layers/MagnifyingGlass.js npm notice 3.8kB src/layers/Marker.js npm notice 1.6kB src/layers/MarkerCluster.js npm notice 1.0kB src/layers/Path.js npm notice 572B src/layers/Polygon.js npm notice 1.9kB src/layers/Polyline.js npm notice 2.9kB src/layers/Popup.js npm notice 1.1kB src/layers/RasterLayer.js npm notice 595B src/layers/Rectangle.js npm notice 1.9kB src/layers/TileLayer.js npm notice 441B src/layers/VectorLayer.js npm notice 1.1kB src/layers/VectorTileLayer.js npm notice 1.7kB src/layers/Velocity.js npm notice 2.4kB src/layers/VideoOverlay.js npm notice 1.1kB src/layers/WMSLayer.js npm notice 11.9kB src/leaflet-heat.js npm notice 4.7kB src/leaflet-magnifyingglass.js npm notice 1.9kB src/leaflet.js npm notice 11.7kB src/Map.js npm notice 294B src/notebook.js npm notice 343B src/projections.js npm notice 1.2kB src/utils.js npm notice 1.8kB webpack.config.js npm notice === Tarball Details === npm notice name: jupyter-leaflet npm notice version: 0.15.0 npm notice filename: jupyter-leaflet-0.15.0.tgz npm notice package size: 1.2 MB npm notice unpacked size: 4.5 MB npm notice shasum: 7c42d8dc1ee420baaabe51df94e146df0768a6a3 npm notice integrity: sha512-m5m3XVOY9tky/[...]CGZbwfT+//MlQ== npm notice total files: 89 npm notice jupyter-leaflet-0.15.0.tgz npm notice npm notice New major version of npm available! 7.7.6 -> 8.3.0 npm notice Changelog: <https://github.com/npm/cli/releases/tag/v8.3.0> npm notice Run `npm install -g npm@8.3.0` to update! npm notice Node v15.14.0 Yarn configuration loaded. Building jupyterlab assets (production, minimized) > node /opt/conda/envs/birdy/lib/python3.9/site-packages/jupyterlab/staging/yarn.js install --non-interactive yarn install v1.21.1 [1/5] Validating package.json... [2/5] Resolving packages... warning jupyter-leaflet > leaflet.vectorgrid > vector-tile@1.3.0: This module has moved: please install @mapbox/vector-tile instead warning jupyter-leaflet > leaflet.vectorgrid > vector-tile > point-geometry@0.0.0: This module has moved: please install @mapbox/point-geometry instead [3/5] Fetching packages... warning @blueprintjs/core@3.52.0: Invalid bin entry for "upgrade-blueprint-2.0.0-rename" (in "@blueprintjs/core"). warning @blueprintjs/core@3.52.0: Invalid bin entry for "upgrade-blueprint-3.0.0-rename" (in "@blueprintjs/core"). warning sha.js@2.4.11: Invalid bin entry for "sha.js" (in "sha.js"). error @npmcli/fs@1.1.0: The engine "node" is incompatible with this module. Expected version "^12.13.0 || ^14.15.0 || >=16". Got "15.14.0" error Found incompatible module. info Visit https://yarnpkg.com/en/docs/cli/install for documentation about this command. npm dependencies failed to install Traceback (most recent call last): File "/opt/conda/envs/birdy/lib/python3.9/site-packages/jupyterlab/debuglog.py", line 48, in debug_logging yield File "/opt/conda/envs/birdy/lib/python3.9/site-packages/jupyterlab/labextensions.py", line 140, in start build(clean_staging=self.should_clean, File "/opt/conda/envs/birdy/lib/python3.9/site-packages/jupyterlab/commands.py", line 482, in build return handler.build(name=name, version=version, static_url=static_url, File "/opt/conda/envs/birdy/lib/python3.9/site-packages/jupyterlab/commands.py", line 688, in build raise RuntimeError(msg) RuntimeError: npm dependencies failed to install Exiting application: lab ```

… not useful and problem with jupyter labextension install command

This explains why we were stuck on 3.7 before when still using conda instead of mamba.

…rformance, we are using mamba now

… little the build speed

Not able to use the wrapper script: ``` $ /usr/local/bin/start-notebook.sh WARNING: Jupyter Notebook deprecation notice https://github.com/jupyter/docker-stacks#jupyter-notebook-deprecation-notice. Entered start.sh with args: jupyter notebook $ JUPYTER_ENABLE_LAB=yes /usr/local/bin/start-notebook.sh Entered start.sh with args: jupyter lab And then nothing happens. ``` Not able to keep using `conda run -n birdy` either, not sure why, maybe because we switched to use mamba: ``` $ conda run -n birdy /usr/local/bin/start-notebook.sh ERROR conda.cli.main_run:execute(33): Subprocess for 'conda run ['/usr/local/bin/start-notebook.sh']' command failed. (See above for error) WARNING: Jupyter Notebook deprecation notice https://github.com/jupyter/docker-stacks#jupyter-notebook-deprecation-notice. Entered start.sh with args: jupyter notebook $ conda run -n birdy jupyter notebook And nothing happens ```

Tried to retain NOTEBOOK_ARGS from https://github.com/jupyter/docker-stacks/blob/ace92d3c5f3e619b4d9c33add1d745ba324ae72c/base-notebook/start-notebook.sh#L19 but not working. Error: ``` $ docker run --rm pavics/workflow-tests:211220-dev-commit-5d3c259 [C 2021-12-20 20:32:05.491 ServerApp] No such file or directory: /${NOTEBOOK_ARGS} ```

See jupyterlab/jupyterlab#11726 (comment) Screenshot of error if we skip 'jupyter lab build': https://user-images.githubusercontent.com/11966697/146959076-73254106-bd21-4a04-a3d3-47e09074f1ba.png

… step See comment jupyterlab/jupyterlab#11726 (comment) and issue plotly/jupyter-dash#49

Getting this error with >= 17.1.0: ``` package nodejs-17.1.0-h8ca31f7_1 requires icu >=69.1,<70.0a0, but none of the providers can be installed ``` The lower pin >= 16.0 result in some serious downgrade, but let's try it: ``` Package Version Build Channel Size ────────────────────────────────────────────────────────────────────────────────────────── Upgrade: ────────────────────────────────────────────────────────────────────────────────────────── - libuv 1.41.1 h7f98852_0 installed + libuv 1.42.0 h7f98852_0 conda-forge/linux-64 1 MB - nodejs 15.14.0 h92b4a50_0 installed + nodejs 16.12.0 h92b4a50_0 conda-forge/linux-64 15 MB Downgrade: ────────────────────────────────────────────────────────────────────────────────────────── - configurable-http-proxy 4.5.0 node15_he6ea98c_1 installed + configurable-http-proxy 1.3.0 0 conda-forge/linux-64 233 KB - jupyterhub 2.0.0 hd8ed1ab_0 installed + jupyterhub 1.3.0 py37h89c1867_0 conda-forge/linux-64 5 KB - jupyterhub-base 2.0.0 pyhd8ed1ab_0 installed + jupyterhub-base 1.3.0 py37h89c1867_0 conda-forge/linux-64 2 MB Summary: Upgrade: 2 packages Downgrade: 3 packages Total download: 18 MB ```

conda-forge/ravenpy-feedstock#15

The reason why the old startup CMD was hanging was because the new script assumed user jovyan exists in the docker image. The script was using "set -e" so any errors just make the script exit immediately. So we rollback before this commit jupyter/docker-stacks@c772e98. The commit was part of this PR jupyter/docker-stacks#1546. Error with the new script: it just stops there: ``` (birdy) jenkins@e4c447185b3b:/$ /usr/local/bin/start-notebook.sh + set -e + [[ -n '' ]] + wrapper= + [[ '' == \y\e\s ]] + [[ -n '' ]] + echo 'WARNING: Jupyter Notebook deprecation notice https://github.com/jupyter/docker-stacks#jupyter-notebook-deprecation-notice.' WARNING: Jupyter Notebook deprecation notice https://github.com/jupyter/docker-stacks#jupyter-notebook-deprecation-notice. + exec /usr/local/bin/start.sh jupyter notebook + set -e + _log 'Entered start.sh with args:' jupyter notebook + [[ Entered start.sh with args: jupyter notebook == \E\R\R\O\R\:* ]] + [[ Entered start.sh with args: jupyter notebook == \W\A\R\N\I\N\G\:* ]] + [[ '' == '' ]] + echo 'Entered start.sh with args:' jupyter notebook Entered start.sh with args: jupyter notebook + '[' 2 -eq 0 ']' + cmd=("$@") + run-hooks /usr/local/bin/start-notebook.d + [[ ! -d /usr/local/bin/start-notebook.d ]] + return ++ id -u + '[' 1000 == 0 ']' + [[ '' == \1 ]] + [[ '' == \y\e\s ]] ++ id -u jovyan + JOVYAN_UID= ```

…e -f /environment.yml'

conda-forge/ravenpy-feedstock#17

@Zeitsperre

Feedback from @Zeitsperre

…rmance regression ``` Updating specs: - shapely[version='<=1.7.1'] - bokeh[version='<=2.3.3'] - ca-certificates - certifi - openssl Package Version Build Channel Size ───────────────────────────────────────────────────────────────────────────────── Change: ───────────────────────────────────────────────────────────────────────────────── - cartopy 0.20.1 py37h9a08e6e_5 installed + cartopy 0.20.1 py37h259df35_1 conda-forge/linux-64 2 MB - fiona 1.8.20 py37h2cf5250_4 installed + fiona 1.8.20 py37hb7e2723_2 conda-forge/linux-64 1 MB - geotiff 1.7.0 h90a4e78_5 installed + geotiff 1.7.0 hcfb7246_3 conda-forge/linux-64 298 KB - librttopo 1.1.0 h30b5eef_8 installed + librttopo 1.1.0 h1185371_6 conda-forge/linux-64 235 KB - libspatialite 5.0.1 hf3ee066_12 installed + libspatialite 5.0.1 h8796b1e_9 conda-forge/linux-64 4 MB - pyproj 3.2.1 py37hb589d83_5 installed + pyproj 3.2.1 py37hd495510_2 conda-forge/linux-64 499 KB - rasterio 1.2.10 py37h4e26c36_3 installed + rasterio 1.2.10 py37hffcf04f_0 conda-forge/linux-64 8 MB Downgrade: ───────────────────────────────────────────────────────────────────────────────── - bokeh 2.4.2 py37h89c1867_0 installed + bokeh 2.3.3 py37h89c1867_0 conda-forge/linux-64 8 MB - cfitsio 4.0.0 h9a35b8e_0 installed + cfitsio 3.470 hb418390_7 conda-forge/linux-64 1 MB - gdal 3.4.0 py37hd5a0ba4_11 installed + gdal 3.3.3 py37h7b489ff_0 conda-forge/linux-64 2 MB - geos 3.10.1 h9c3ff4c_1 installed + geos 3.9.1 h9c3ff4c_2 conda-forge/linux-64 1 MB - geoviews 1.9.2 pyhd8ed1ab_0 installed + geoviews 1.9.1 pyhd8ed1ab_1 conda-forge/noarch 6 KB - geoviews-core 1.9.2 pyha770c72_0 installed + geoviews-core 1.9.1 pyha770c72_1 conda-forge/noarch 404 KB - imagecodecs 2021.11.20 py37h4167934_1 installed + imagecodecs 2021.8.26 py37hfe5a812_1 conda-forge/linux-64 7 MB - jupyter_bokeh 3.0.4 pyhd8ed1ab_0 installed + jupyter_bokeh 3.0.2 pyhd8ed1ab_0 conda-forge/noarch 1 MB - libgdal 3.4.0 h4471fe2_11 installed + libgdal 3.3.3 h356f897_0 conda-forge/linux-64 13 MB - panel 0.12.6 pyhd8ed1ab_0 installed + panel 0.12.1 pyhd8ed1ab_0 conda-forge/noarch 10 MB - poppler 21.11.0 ha39eefc_0 installed + poppler 21.09.0 ha39eefc_3 conda-forge/linux-64 17 MB - proj 8.2.0 h277dcde_0 installed + proj 8.1.1 h277dcde_2 conda-forge/linux-64 3 MB - pygeos 0.12.0 py37h9b0f7a3_0 installed + pygeos 0.10.2 py37h48c49eb_0 conda-forge/linux-64 410 KB - shapely 1.8.0 py37h9b0f7a3_4 installed + shapely 1.7.1 py37h48c49eb_5 conda-forge/linux-64 442 KB - tiledb 2.5.3 h2038895_0 installed + tiledb 2.3.4 he87e0bf_0 conda-forge/linux-64 4 MB ```

…p python 3.7 soon

…ion problems Mamba create temp file at root: ``` Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/conda/exceptions.py", line 1080, in __call__ return func(*args, **kwargs) File "/opt/conda/lib/python3.9/site-packages/conda_env/cli/main.py", line 80, in do_call exit_code = getattr(module, func_name)(args, parser) File "/opt/conda/lib/python3.9/site-packages/conda_env/cli/main_update.py", line 123, in execute result[installer_type] = installer.install(prefix, specs, args, env) File "/opt/conda/lib/python3.9/site-packages/conda_env/installers/pip.py", line 70, in install return _pip_install_via_requirements(*args, **kwargs) File "/opt/conda/lib/python3.9/site-packages/conda_env/installers/pip.py", line 44, in _pip_install_via_requirements requirements = Utf8NamedTemporaryFile(mode='w', File "/opt/conda/lib/python3.9/site-packages/conda/auxlib/compat.py", line 88, in Utf8NamedTemporaryFile return NamedTemporaryFile( File "/opt/conda/lib/python3.9/tempfile.py", line 541, in NamedTemporaryFile (fd, name) = _mkstemp_inner(dir, prefix, suffix, flags, output_type) File "/opt/conda/lib/python3.9/tempfile.py", line 251, in _mkstemp_inner fd = _os.open(file, flags, 0o600) PermissionError: [Errno 13] Permission denied: '/condaenv.ym733vc0.requirements.txt' `$ /opt/conda/bin/mamba update --name birdy --file /environment.yml` ```

…kins do not have write perm ``` Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/conda/exceptions.py", line 1080, in __call__ return func(*args, **kwargs) File "/opt/conda/lib/python3.9/site-packages/conda_env/cli/main.py", line 80, in do_call exit_code = getattr(module, func_name)(args, parser) File "/opt/conda/lib/python3.9/site-packages/conda_env/cli/main_update.py", line 123, in execute result[installer_type] = installer.install(prefix, specs, args, env) File "/opt/conda/lib/python3.9/site-packages/conda_env/installers/pip.py", line 70, in install return _pip_install_via_requirements(*args, **kwargs) File "/opt/conda/lib/python3.9/site-packages/conda_env/installers/pip.py", line 44, in _pip_install_via_requirements requirements = Utf8NamedTemporaryFile(mode='w', File "/opt/conda/lib/python3.9/site-packages/conda/auxlib/compat.py", line 88, in Utf8NamedTemporaryFile return NamedTemporaryFile( File "/opt/conda/lib/python3.9/tempfile.py", line 541, in NamedTemporaryFile (fd, name) = _mkstemp_inner(dir, prefix, suffix, flags, output_type) File "/opt/conda/lib/python3.9/tempfile.py", line 251, in _mkstemp_inner fd = _os.open(file, flags, 0o600) PermissionError: [Errno 13] Permission denied: '/condaenv.ym733vc0.requirements.txt' `$ /opt/conda/bin/mamba update --name birdy --file /environment.yml` ```

``` Step 10/17 : RUN python -m ipykernel install --name birdy ---> Running in e4cec66d6932 [Errno 13] Permission denied: '/usr/local/share/jupyter' The command '/bin/sh -c python -m ipykernel install --name birdy' returned a non-zero code: 1 ```

…ase by mamba Did not work, got this error: ``` Encountered problems while solving: - package jupyterhub-base-1.3.0-py39h06a4308_1 requires pycurl, but none of the providers can be installed ```

…enssl significantly ``` - # - openssl 3.0.0 h7f98852_2 installed - # + openssl 1.1.1l h7f98852_0 conda-forge/linux-64 2 MB ```

See mamba-org/gator#170.

Not sure why cartopy-0.14.3 is selected! Previous build selected cartopy-0.20.1 and geos-3.9.1 was found! ``` Encountered problems while solving: - nothing provides geos 3.5.* needed by cartopy-0.14.3-np110py27_4 ```

Sample error: ``` _______ pavics-sdi-master/docs/source/notebooks/forecasts.ipynb::Cell 2 ________ Notebook cell execution failed Cell 2: Cell outputs differ Input: import hvplot.xarray mtl = ds.sel(lon=45.5, lat=360 - 73.5, method="nearest") mtl.pr.hvplot(x="time", width=300) + mtl.tas.hvplot(x="time", width=300) Traceback: mismatch 'application/vnd.holoviews_load.v0+json' assert reference_output == test_output failed: '\n(function(...\n}(window));' == '\n(function(...\n}(window));' Skipping 1273 identical leading characters in diff, use -v to show , now()); + root._bokeh_is_loading = css_urls.length + js_urls.length + js_modules.length; function on_load() { root._bokeh_is_loading--; if (root._bokeh_is_loading === 0) { console.debug("Bokeh: all BokehJS libraries/stylesheets loaded"); run_callbacks() } } ( ... ) ```

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docker: prevent manual pin of dependencies and improve build speed #95

docker: prevent manual pin of dependencies and improve build speed #95

Commits on Dec 17, 2021

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