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climex.ipynb, eccc-geoapi-climate-stations.ipynb: fix Jenkins failure
Probably because PR #268 has not been refreshed using current Jupyter env. ``` _________ pavics-sdi-master/docs/source/notebooks/climex.ipynb::Cell 1 _________ Notebook cell execution failed Cell 1: Cell outputs differ Input: # Opening the link takes a while, because the server creates an aggregated view of 435,000 individual files. url = cat.df.path[0] ds = xr.open_dataset(url, chunks=dict(realization=2, time=30 * 3)) ds Traceback: mismatch 'text/plain' assert reference_output == test_output failed: '<xarray.Data... RCM' == '<xarray.Data...N.string1: 1' Skipping 599 identical leading characters in diff, use -v to show - ted_pole |S64 ... + ted_pole (time) |S64 dask.array<chunksize=(90,), meta=np.ndarray> tasmin (realization, time, rlat, rlon) float32 dask.array<chunksize=(2, 90, 280, 280), meta=np.ndarray> tasmax (realization, time, rlat, rlon) float32 dask.array<chunksize=(2, 90, 280, 280), meta=np.ndarray> tas (realization, time, rlat, rlon) float32 dask.array<chunksize=(2, 90, 280, 280), meta=np.ndarray> pr (realization, time, rlat, rlon) float32 dask.array<chunksize=(2, 90, 280, 280), meta=np.ndarray> prsn (realization, time, rlat, rlon) float32 dask.array<chunksize=(2, 90, 280, 280), meta=np.ndarray> - Attributes: (12/30) ? ^^ + Attributes: (12/29) ? ^^ - Conventions: CF-1.6 ? --- + Conventions: CF-1.6 - DODS.dimName: string1 ? --- + DODS.dimName: string1 - DODS.strlen: 0 ? ^^^^ + DODS.strlen: 1 ? ^ - EXTRA_DIMENSION.bnds: 2 ? --- + EXTRA_DIMENSION.bnds: 2 - NCO: "4.5.2" ? --- + NCO: "4.5.2" - abstract: The ClimEx CRCM5 Large Ensemble of high-resolut... ? --- + abstract: The ClimEx CRCM5 Large Ensemble of high-resolution... ? +++ - ... ... ? --- + ... ... + product: output - project_id: CLIMEX ? --- + project_id: CLIMEX - rcm_version_id: v3331 ? --- + rcm_version_id: v3331 - terms_of_use: http://www.climex-project.org/sites/default/fil... ? --- + terms_of_use: http://www.climex-project.org/sites/default/files/... ? +++ - title: The ClimEx CRCM5 Large Ensemble ? --- + title: The ClimEx CRCM5 Large Ensemble - type: RCM ? --- - + type: RCM - EXTRA_DIMENSION.string1: 1 _________ pavics-sdi-master/docs/source/notebooks/climex.ipynb::Cell 8 _________ Notebook cell execution failed Cell 8: Cell outputs differ Input: # Subset over the Montreal gridpoint ds = xr.open_dataset(url, chunks=dict(realization=2, time=-1, rlon=25, rlat=25)) pt = subset_gridpoint(ds, lon=-73.69, lat=45.50) print("Input dataset for Montreal :") display(pt) out = xclim.atmos.max_1day_precipitation_amount(pr=pt.pr, freq="YS") print("Maximim 1-day precipitation `lazy` output ..") out Traceback: mismatch 'text/plain' assert reference_output == test_output failed: '<xarray.Data... RCM' == '<xarray.Data...N.string1: 1' Skipping 372 identical leading characters in diff, use -v to show - ted_pole |S64 b'' + ted_pole (time) |S64 dask.array<chunksize=(52924,), meta=np.ndarray> tasmin (realization, time) float32 dask.array<chunksize=(2, 52924), meta=np.ndarray> tasmax (realization, time) float32 dask.array<chunksize=(2, 52924), meta=np.ndarray> tas (realization, time) float32 dask.array<chunksize=(2, 52924), meta=np.ndarray> pr (realization, time) float32 dask.array<chunksize=(2, 52924), meta=np.ndarray> prsn (realization, time) float32 dask.array<chunksize=(2, 52924), meta=np.ndarray> - Attributes: (12/30) ? ^^ + Attributes: (12/29) ? ^^ - Conventions: CF-1.6 ? --- + Conventions: CF-1.6 - DODS.dimName: string1 ? --- + DODS.dimName: string1 - DODS.strlen: 0 ? ^^^^ + DODS.strlen: 1 ? ^ - EXTRA_DIMENSION.bnds: 2 ? --- + EXTRA_DIMENSION.bnds: 2 - NCO: "4.5.2" ? --- + NCO: "4.5.2" - abstract: The ClimEx CRCM5 Large Ensemble of high-resolut... ? --- + abstract: The ClimEx CRCM5 Large Ensemble of high-resolution... ? +++ - ... ... ? --- + ... ... + product: output - project_id: CLIMEX ? --- + project_id: CLIMEX - rcm_version_id: v3331 ? --- + rcm_version_id: v3331 - terms_of_use: http://www.climex-project.org/sites/default/fil... ? --- + terms_of_use: http://www.climex-project.org/sites/default/files/... ? +++ - title: The ClimEx CRCM5 Large Ensemble ? --- + title: The ClimEx CRCM5 Large Ensemble - type: RCM ? --- - + type: RCM - EXTRA_DIMENSION.string1: 1 _ pavics-sdi-master/docs/source/notebooks/eccc-geoapi-climate-stations.ipynb::Cell 3 _ Notebook cell execution failed Cell 3: Cell outputs differ Input: import pandas as pd # Create a datetime.Timedelta object from the subtraction of two dates. delta = pd.to_datetime(stations["DLY_LAST_DATE"]) - pd.to_datetime( stations["DLY_FIRST_DATE"] ) # Get the number of days in the time delta stations["n_days"] = delta.apply(lambda x: x.days) # Compute condition over_50 = stations["n_days"] > 50 * 365.25 # Index the data frame using the condition select = stations[over_50] select.head() Traceback: mismatch 'text/plain' assert reference_output == test_output failed: ' id ...x 35 columns]' == ' id ...x 35 columns]' - id STN_ID STATION_NAME PROV_STATE_TERR_CODE ENG_PROV_NAME \ + id STN_ID STATION_NAME PROV_STATE_TERR_CODE ENG_PROV_NAME \ ? +++ - 2 8203400 6399 MALAY FALLS NS NOVA SCOTIA + 2 8203400 6399 MALAY FALLS NS NOVA SCOTIA ? +++ - 18 8205090 6465 SHEARWATER A NS NOVA SCOTIA - 19 8205698 6485 SYDNEY NS NOVA SCOTIA ? ^ + 18 8205698 6485 SYDNEY NS NOVA SCOTIA ? ^ +++ - 23 8206300 6506 WHITEHEAD NS NOVA SCOTIA ? ^ + 22 8206300 6506 WHITEHEAD NS NOVA SCOTIA ? ^ +++ - 24 8206440 6513 WOLFVILLE NS NOVA SCOTIA ? ^ + 23 8206440 6513 WOLFVILLE NS NOVA SCOTIA ? ^ +++ + 33 8200100 6289 ANNAPOLIS ROYAL NS NOVA SCOTIA FRE_PROV_NAME COUNTRY LATITUDE LONGITUDE TIMEZONE ... \ 2 NOUVELLE-��COSSE CAN 445900000 -622900000 AST ... - 18 NOUVELLE-��COSSE CAN 443800000 -633000000 AST ... - 19 NOUVELLE-��COSSE CAN 460900000 -601200000 AST ... ? ^ + 18 NOUVELLE-��COSSE CAN 460900000 -601200000 AST ... ? ^ - 23 NOUVELLE-��COSSE CAN 451300000 -611100000 AST ... ? ^ + 22 NOUVELLE-��COSSE CAN 451300000 -611100000 AST ... ? ^ - 24 NOUVELLE-��COSSE CAN 450600000 -642200000 AST ... ? ^ + 23 NOUVELLE-��COSSE CAN 450600000 -642200000 AST ... ? ^ + 33 NOUVELLE-��COSSE CAN 444500000 -653100000 AST ... HLY_LAST_DATE DLY_FIRST_DATE DLY_LAST_DATE MLY_FIRST_DATE \ 2 /DATE/TIME/ /DATE/ /DATE/ /DATE/ - 18/DATE/TIME/ /DATE/ /DATE/ /DATE/ - 19 NaT /DATE/ /DATE/ /DATE/ ? ^ + 18 NaT /DATE/ /DATE/ /DATE/ ? ^ + 22 NaT /DATE/ /DATE/ /DATE/ 23 NaT /DATE/ /DATE/ /DATE/ - 24 NaT /DATE/ /DATE/ /DATE/ ? ^^ + 33 NaT /DATE/ /DATE/ /DATE/ ? ^^ MLY_LAST_DATE HAS_MONTHLY_SUMMARY HAS_NORMALS_DATA HAS_HOURLY_DATA \ 2 /DATE/ Y N N - 18 /DATE/ Y Y Y - 19 /DATE/ Y N N ? ^ + 18 /DATE/ Y N N ? ^ + 22 /DATE/ Y N N 23 /DATE/ Y N N - 24 /DATE/ Y N N ? ^^ + 33 /DATE/ Y N N ? ^^ geometry n_days 2 POINT (-62.48333 44.98333) 18474 - 18 POINT (-63.50000 44.63333) 23325 - 19 POINT (-60.20000 46.15000) 26021 ? ^ + 18 POINT (-60.20000 46.15000) 26021 ? ^ - 23 POINT (-61.18333 45.21667) 27970 ? ^ + 22 POINT (-61.18333 45.21667) 27970 ? ^ - 24 POINT (-64.36667 45.10000) 28883 ? ^ + 23 POINT (-64.36667 45.10000) 28883 ? ^ + 33 POINT (-65.51667 44.75000) 34032 [5 rows x 35 columns] _ pavics-sdi-master/docs/source/notebooks/eccc-geoapi-climate-stations.ipynb::Cell 5 _ Notebook cell execution failed Cell 5: Cell outputs differ Input: # Adjust directory if running this locally. # rect = gpd.read_file("~/Downloads/data.geojson") # Here we're using an existing file so the notebook runs without user interaction. rect = gpd.read_file("./data.geojson") # Filter stations DataFrame using bbox inbox = select.within(rect.loc[0].geometry) print("Number of stations within subregion: ", sum(inbox)) sub_select = select[inbox] sub_select.head() Traceback: mismatch 'text/plain' assert reference_output == test_output failed: ' id...x 35 columns]' == ' id...x 35 columns]' Skipping 64 identical leading characters in diff, use -v to show Skipping 51 identical trailing characters in diff, use -v to show _NAME \ - 19 8205698 6485 SYDNEY NS NOVA SCOTIA ? ^ + 18 8205698 6485 SYDNEY NS NOVA SCOTIA ? ^ - 23 8206300 6506 WHITEHEAD NS NOVA SCOTIA ? ^ + 22 8206300 6506 WHITEHEAD NS NOVA SCOTIA ? ^ - 45 8201410 6336 DEMING NS NOVA SCOTIA ? ^ + 43 8201410 6336 DEMING NS NOVA SCOTIA ? ^ - 134 8205600 6481 STILLWATER NS NOVA SCOTIA ? ^ + 133 8205600 6481 STILLWATER NS NOVA SCOTIA ? ^ - 146 8201000 6329 COLLEGEVILLE NS NOVA SCOTIA ? ^ + 144 8201000 6329 COLLEGEVILLE NS NOVA SCOTIA ? ^ FRE_PROV_NAME COUNTRY LATITUDE LONGITUDE TIMEZONE ... \ - 19 NOUVELLE-��COSSE CAN 460900000 -601200000 AST ... ? ^ + 18 NOUVELLE-��COSSE CAN 460900000 -601200000 AST ... ? ^ - 23 NOUVELLE-��COSSE CAN 451300000 -611100000 AST ... ? ^ + 22 NOUVELLE-��COSSE CAN 451300000 -611100000 AST ... ? ^ - 45 NOUVELLE-��COSSE CAN 451259007 -611040090 AST ... ? ^ + 43 NOUVELLE-��COSSE CAN 451259007 -611040090 AST ... ? ^ - 134 NOUVELLE-��COSSE CAN 451100000 -620000000 AST ... ? ^ + 133 NOUVELLE-��COSSE CAN 451100000 -620000000 AST ... ? ^ - 146 NOUVELLE-��COSSE CAN 452900000 -620100000 AST ... ? ^ + 144 NOUVELLE-��COSSE CAN 452900000 -620100000 AST ... ? ^ HLY_LAST_DATE DLY_FIRST_DATE DLY_LAST_DATE MLY_FIRST_DATE MLY_LAST_DATE \ - 19 NaT /DATE/ /DATE/ /DATE/ /DATE/ ? ^ + 18 NaT /DATE/ /DATE/ /DATE/ /DATE/ ? ^ - 23 NaT /DATE/ /DATE/ /DATE/ /DATE/ ? ^ + 22 NaT /DATE/ /DATE/ /DATE/ /DATE/ ? ^ - 45 NaT /DATE/ /DATE/ /DATE/ /DATE/ ? ^ + 43 NaT /DATE/ /DATE/ /DATE/ /DATE/ ? ^ - 134 NaT /DATE/ /DATE/ /DATE/ /DATE/ ? ^ + 133 NaT /DATE/ /DATE/ /DATE/ /DATE/ ? ^ - 146 NaT /DATE/ /DATE/ /DATE/ /DATE/ ? ^ + 144 NaT /DATE/ /DATE/ /DATE/ /DATE/ ? ^ HAS_MONTHLY_SUMMARY HAS_NORMALS_DATA HAS_HOURLY_DATA \ - 19 Y N N ? ^ + 18 Y N N ? ^ - 23 Y N N ? ^ + 22 Y N N ? ^ - 45 Y Y N ? ^ + 43 Y Y N ? ^ - 134 Y N N ? ^ + 133 Y N N ? ^ - 146 Y Y N ? ^ + 144 Y Y N ? ^ geometry n_days - 19 POINT (-60.20000 46.15000) 26021 ? ^ + 18 POINT (-60.20000 46.15000) 26021 ? ^ - 23 POINT (-61.18333 45.21667) 27970 ? ^ + 22 POINT (-61.18333 45.21667) 27970 ? ^ - 45 POINT (-61.17780 45.21639) 20179 ? ^ + 43 POINT (-61.17780 45.21639) 20179 ? ^ - 134 POINT (-62.00000 45.18333) 23345 ? ^ + 133 POINT (-62.00000 45.18333) 23345 ? ^ - 146 POINT ( ? ^ + 144 POINT ( ? ^ ```
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