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fix parsing VCFs in JSON #1169

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fix parsing VCFs in JSON

fix parsing VCFs in JSON #1169

Triggered via push September 17, 2024 11:11
@nebfieldnebfield
pushed f17b947
dev
Status Success
Total duration 10m 47s
Artifacts –

ci.yml

on: push
preload_docker  /  docker
2m 5s
preload_docker / docker
preload_singularity  /  singularity
1m 16s
preload_singularity / singularity
preload_ancestry  /  preload_reference
5s
preload_ancestry / preload_reference
Matrix: pytest_workflow_docker
Matrix: standard_test_docker / docker
Matrix: standard_test_docker / singularity
Matrix: pytest_workflow_singularity
Matrix: standard_test_singularity / docker
Matrix: standard_test_singularity / singularity
ancestry_docker  /  docker
8m 15s
ancestry_docker / docker
ancestry_docker  /  singularity
0s
ancestry_docker / singularity
ancestry_vcf_docker  /  docker
8m 17s
ancestry_vcf_docker / docker
ancestry_vcf_docker  /  singularity
0s
ancestry_vcf_docker / singularity
ancestry_singularity  /  docker
0s
ancestry_singularity / docker
ancestry_singularity  /  singularity
7m 35s
ancestry_singularity / singularity
ancestry_vcf_singularity  /  docker
0s
ancestry_vcf_singularity / docker
ancestry_vcf_singularity  /  singularity
7m 32s
ancestry_vcf_singularity / singularity
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4 warnings
pytest_workflow_docker (test combine scorefiles module) / docker
Failed to download action 'https://api.github.com/repos/nf-core/setup-nextflow/tarball/561fcfc7146dcb12e3871909b635ab092a781f34'. Error: The request was canceled due to the configured HttpClient.Timeout of 100 seconds elapsing.
pytest_workflow_docker (test combine scorefiles module) / docker
Back off 17.603 seconds before retry.
pytest_workflow_docker (test combine scorefiles module) / docker
Failed to download action 'https://api.github.com/repos/nf-core/setup-nextflow/tarball/561fcfc7146dcb12e3871909b635ab092a781f34'. Error: The request was canceled due to the configured HttpClient.Timeout of 100 seconds elapsing.
pytest_workflow_docker (test combine scorefiles module) / docker
Back off 24.481 seconds before retry.