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run pytest workflow #634

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run pytest workflow

run pytest workflow #634

Run time

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Job Run time
preload_singularity / singularity
4m 10s
preload_docker / docker
4m 10s
standard_test_singularity / docker
0s
standard_test_singularity / singularity (test, singularity, 22.10.0)
1m 19s
standard_test_singularity / singularity (test, singularity, latest)
1m 48s
standard_test_docker / docker (test, docker, 22.10.0)
2m 6s
standard_test_docker / docker (test, docker, latest)
2m 19s
standard_test_docker / singularity
0s
pytest_workflow_docker (pgscatalog test bad accession) / docker
2m 31s
pytest_workflow_docker (pgscatalog test --efo_trait --pgp_id and --pgs_id) / docker
2m 5s
pytest_workflow_docker (pgscatalog test good and bad accessions GRCh38) / docker
1m 37s
pytest_workflow_docker (pgscatalog test --pgs_id) / docker
1m 43s
pytest_workflow_docker (plink2 testmultiscore) / docker
1m 0s
pytest_workflow_docker (plink2 testmultiscorefail) / docker
50s
pytest_workflow_docker (plink2 testrelabelbim) / docker
1m 0s
pytest_workflow_docker (plink2 testrelabelpvar) / docker
1m 6s
pytest_workflow_docker (plink2 testscore) / docker
52s
pytest_workflow_docker (plink2 testsmallmultiscore) / docker
58s
pytest_workflow_docker (plink2 testsmallscore) / docker
1m 0s
pytest_workflow_docker (plink2 vcf) / docker
49s
pytest_workflow_docker (test apply score subworkflow) / docker
2m 17s
pytest_workflow_docker (test combine scorefiles module) / docker
2m 26s
pytest_workflow_docker (test input check subworkflow) / docker
1m 35s
pytest_workflow_docker (test input check subworkflow with liftover 37to38) / docker
1m 28s
pytest_workflow_docker (test input check subworkflow with PGS catalog API) / docker
1m 55s
pytest_workflow_docker (test input check subworkflow with PGS catalog API and whitespace) / docker
1m 53s
pytest_workflow_docker (test input check subworkflow with liftover 38to37) / docker
1m 25s
pytest_workflow_docker (test make compatible subworkflow with bfile) / docker
2m 27s
pytest_workflow_docker (test make compatible subworkflow with vcf) / docker
1m 37s
pytest_workflow_docker (test match combine module) / docker
2m 8s
pytest_workflow_docker (test make compatible subworkflow with pfile) / docker
1m 30s
pytest_workflow_docker (test match module) / docker
1m 54s
pytest_workflow_docker (test perfect apply score) / docker
1m 31s
55m 29s