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fix cache #635

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fix cache

fix cache #635

Run time

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Job Run time
preload_docker / docker
4m 34s
preload_singularity / singularity
4m 49s
standard_test_docker / singularity
0s
standard_test_docker / docker (test, docker, 22.10.0)
1m 57s
standard_test_docker / docker (test, docker, latest)
2m 12s
pytest_workflow_docker (pgscatalog test bad accession) / docker
1m 58s
pytest_workflow_docker (pgscatalog test --efo_trait --pgp_id and --pgs_id) / docker
2m 40s
pytest_workflow_docker (plink2 testmultiscore) / docker
2m 9s
pytest_workflow_docker (pgscatalog test good and bad accessions GRCh38) / docker
1m 49s
pytest_workflow_docker (pgscatalog test --pgs_id) / docker
2m 2s
pytest_workflow_docker (plink2 testmultiscorefail) / docker
2m 7s
pytest_workflow_docker (plink2 testrelabelbim) / docker
1m 52s
pytest_workflow_docker (plink2 testrelabelpvar) / docker
1m 50s
pytest_workflow_docker (plink2 testsmallmultiscore) / docker
2m 31s
pytest_workflow_docker (plink2 testsmallscore) / docker
1m 58s
pytest_workflow_docker (plink2 testscore) / docker
2m 30s
pytest_workflow_docker (plink2 vcf) / docker
1m 53s
pytest_workflow_docker (test apply score subworkflow) / docker
2m 9s
pytest_workflow_docker (test combine scorefiles module) / docker
3m 7s
pytest_workflow_docker (test input check subworkflow) / docker
1m 59s
pytest_workflow_docker (test input check subworkflow with liftover 37to38) / docker
2m 13s
pytest_workflow_docker (test input check subworkflow with liftover 38to37) / docker
2m 2s
pytest_workflow_docker (test input check subworkflow with PGS catalog API) / docker
2m 25s
pytest_workflow_docker (test input check subworkflow with PGS catalog API and whitespace) / docker
2m 37s
pytest_workflow_docker (test make compatible subworkflow with bfile) / docker
2m 4s
pytest_workflow_docker (test make compatible subworkflow with pfile) / docker
2m 6s
pytest_workflow_docker (test make compatible subworkflow with vcf) / docker
2m 16s
pytest_workflow_docker (test match combine module) / docker
2m 16s
pytest_workflow_docker (test match module) / docker
2m 4s
pytest_workflow_docker (test perfect apply score) / docker
2m 6s
standard_test_singularity / singularity (test, singularity, 22.10.0)
1m 28s
standard_test_singularity / singularity (test, singularity, latest)
1m 9s
standard_test_singularity / docker
0s
1h 10m 52s