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fix errors with Seurat5 #49

fix errors with Seurat5

fix errors with Seurat5 #49

Triggered via push November 14, 2023 09:06
Status Failure
Total duration 57m 7s
Artifacts

R-CMD-check.yaml

on: push
Matrix: R-CMD-check
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30 errors and 19 warnings
macOS-latest (release)
--- re-building ‘Getting-Started.Rmd’ using rmarkdown
macOS-latest (release)
processing vignette 'Getting-Started.Rmd' failed with diagnostics:
macOS-latest (release)
Vignette re-building failed.
macOS-latest (release)
Build process failed
macOS-latest (release)
Process completed with exit code 1.
windows-latest (devel)
--- re-building 'Getting-Started.Rmd' using rmarkdown
windows-latest (devel)
processing vignette 'Getting-Started.Rmd' failed with diagnostics:
windows-latest (devel)
Vignette re-building failed.
windows-latest (devel)
Build process failed
windows-latest (devel)
Process completed with exit code 1.
windows-latest (release)
--- re-building 'Getting-Started.Rmd' using rmarkdown
windows-latest (release)
processing vignette 'Getting-Started.Rmd' failed with diagnostics:
windows-latest (release)
Vignette re-building failed.
windows-latest (release)
Build process failed
windows-latest (release)
Process completed with exit code 1.
ubuntu-latest (release)
--- re-building ‘Getting-Started.Rmd’ using rmarkdown
ubuntu-latest (release)
processing vignette 'Getting-Started.Rmd' failed with diagnostics:
ubuntu-latest (release)
Vignette re-building failed.
ubuntu-latest (release)
Build process failed
ubuntu-latest (release)
Process completed with exit code 1.
ubuntu-latest (devel)
--- re-building ‘Getting-Started.Rmd’ using rmarkdown
ubuntu-latest (devel)
processing vignette 'Getting-Started.Rmd' failed with diagnostics:
ubuntu-latest (devel)
Vignette re-building failed.
ubuntu-latest (devel)
Build process failed
ubuntu-latest (devel)
Process completed with exit code 1.
macOS-latest (devel)
--- re-building ‘Getting-Started.Rmd’ using rmarkdown
macOS-latest (devel)
processing vignette 'Getting-Started.Rmd' failed with diagnostics:
macOS-latest (devel)
Vignette re-building failed.
macOS-latest (devel)
Build process failed
macOS-latest (devel)
Process completed with exit code 1.
macOS-latest (release)
No files were found with the provided path: /Users/runner/work/MuDataSeurat/MuDataSeurat/check. No artifacts will be uploaded.
macOS-latest (release)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
macOS-latest (release)
No files were found with the provided path: check. No artifacts will be uploaded.
windows-latest (devel)
No files were found with the provided path: D:/a/MuDataSeurat/MuDataSeurat/check. No artifacts will be uploaded.
windows-latest (devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
windows-latest (devel)
No files were found with the provided path: check. No artifacts will be uploaded.
windows-latest (release)
No files were found with the provided path: D:/a/MuDataSeurat/MuDataSeurat/check. No artifacts will be uploaded.
windows-latest (release)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
windows-latest (release)
No files were found with the provided path: check. No artifacts will be uploaded.
ubuntu-latest (release)
No files were found with the provided path: /home/runner/work/MuDataSeurat/MuDataSeurat/check. No artifacts will be uploaded.
ubuntu-latest (release)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ubuntu-latest (release)
No files were found with the provided path: check. No artifacts will be uploaded.
ubuntu-latest (devel)
No files were found with the provided path: /home/runner/work/MuDataSeurat/MuDataSeurat/check. No artifacts will be uploaded.
ubuntu-latest (devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ubuntu-latest (devel)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (devel)
No files were found with the provided path: /Users/runner/work/MuDataSeurat/MuDataSeurat/check. No artifacts will be uploaded.
macOS-latest (devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
macOS-latest (devel)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (devel)
unable to access index for repository http://cran.us.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.4: