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@PavriLab

Pavri lab

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  1. hicer-nf hicer-nf Public

    Nextflow workflow for basic HiC data processing

    HTML 4 1

  2. repliseq-nf repliseq-nf Public

    Nextflow workflow for basic RepliSeq data processing

    Nextflow 4

  3. IgH_VDJ_MutPE IgH_VDJ_MutPE Public

    Python 2 1

  4. hic_analysis hic_analysis Public

    This repo contains code and instructions on various possible analyses of Hi-C data

    Jupyter Notebook 2

  5. inisite-nf inisite-nf Public

    Nextflow workflow for reproducible SNS-seq peak calling

    Python 1

  6. IgH_VDJ_PROcapseq IgH_VDJ_PROcapseq Public

    Python 1 1

Repositories

Showing 10 of 14 repositories
  • Schoeberl_Fitz_vonderLinde_et_al Public Forked from PavriLab/costea_schoeberl_et_al

    repository for Tri-C data related code for Schoeberl, Fitz, von der Linde et al.

    PavriLab/Schoeberl_Fitz_vonderLinde_et_al’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Aug 10, 2024
  • hicer-nf Public

    Nextflow workflow for basic HiC data processing

    PavriLab/hicer-nf’s past year of commit activity
    HTML 4 MIT 1 1 0 Updated Feb 14, 2024
  • Malzl_Peycheva_et_al_2023 Public

    Repository for code of analyses presented in the paper

    PavriLab/Malzl_Peycheva_et_al_2023’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 9, 2023
  • inisite-nf Public

    Nextflow workflow for reproducible SNS-seq peak calling

    PavriLab/inisite-nf’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Sep 15, 2023
  • IgH_VDJ_PROcapseq Public
    PavriLab/IgH_VDJ_PROcapseq’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Jun 13, 2023
  • IgH_VDJ_MutPE Public
    PavriLab/IgH_VDJ_MutPE’s past year of commit activity
    Python 2 MIT 1 0 0 Updated Jun 13, 2023
  • mm9_AID_off_targets_PROseq_PROcap_mutations_cytosines Public
    PavriLab/mm9_AID_off_targets_PROseq_PROcap_mutations_cytosines’s past year of commit activity
    R 0 0 0 0 Updated Apr 2, 2023
  • repliseq-nf Public

    Nextflow workflow for basic RepliSeq data processing

    PavriLab/repliseq-nf’s past year of commit activity
    Nextflow 4 MIT 0 1 0 Updated Oct 30, 2022
  • costea_schoeberl_et_al Public

    repository for Tri-C and Micro-C data related code for Costea and Schoeberl et al.

    PavriLab/costea_schoeberl_et_al’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Oct 27, 2022
  • hic_analysis Public

    This repo contains code and instructions on various possible analyses of Hi-C data

    PavriLab/hic_analysis’s past year of commit activity
    Jupyter Notebook 2 0 0 0 Updated Jul 19, 2022
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