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feat: bwa-meme picard option (snakemake#558)
* typo in rule naming, reactivate picard option, picard test * wrongly configured test * wrongly configured test again * genome wildcard is now hardcoded in test * wrapper path * dont use other wrappers in test * dont use other wrappers in test * environment.yaml in test * try again wrapper in test * try index wrapper again * use all rule * version index wrapper * remove index env * used_wrappers.yaml * used_wrappers.yaml * swap for github action * swap 10g * swap 20g * number of model parameters in index to decrease resource consumption for test * revert swap size * different approach, zipped file now * snakefmt, black * log for extraction * conda for gzip to satisfy linter * add the yaml * mbuffer to 2g
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bio/bwa-meme/mem/test/genome.fasta.suffixarray_uint64_L2_PARAMETERS.gz
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- gzip ==1.12 |
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