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Update basicpy dependency #230

Update basicpy dependency

Update basicpy dependency #230

Workflow file for this run

name: Package tests
on:
pull_request:
branches:
- main
- master
- dev
push:
branches-ignore:
- main
- master
- dev
workflow_call:
permissions:
contents: read
jobs:
package-filter:
name: Filter for updated package
uses: ./.github/workflows/package-filter.yml
with:
num-commits: 0
ignore-missing-dev: false
pre-commit:
name: Pre-commit | ${{ matrix.package_name }}
needs: package-filter
if: ${{ needs.package-filter.outputs.num_packages > 0 }}
strategy:
fail-fast: false
matrix: ${{ fromJson(needs.package-filter.outputs.matrix) }}
runs-on: ubuntu-latest
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: '3.9'
- name: Install Poetry
uses: abatilo/actions-poetry@v2
- name: Install pre-commit
run: |
pip install pre-commit
- name: Run pre-commit hooks and check for changes
run: |
cd "${{ matrix.package_dir }}"
poetry run pre-commit run --files ./**/**
if [[ $(git status --porcelain) ]]
then
echo "::error::pre-commit hooks failed for ${{ matrix.package_name }}" && exit 1
fi
docker:
name: Docker | Build ${{ matrix.package_name }}
needs: package-filter
if: ${{ needs.package-filter.outputs.num_packages > 0 }}
strategy:
fail-fast: false
matrix: ${{ fromJson(needs.package-filter.outputs.matrix) }}
runs-on: ubuntu-latest
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Check if Dockerfile exists
id: check_dockerfile
run: |
if [ -f "${{ matrix.package_dir }}/Dockerfile" ]; then
echo "Dockerfile exists"
echo "dockerfile_exists=true" >> $GITHUB_ENV
else
echo "Dockerfile does not exist"
echo "dockerfile_exists=false" >> $GITHUB_ENV
fi
- name: Docker | Tag
id: docker_tag
if: env.dockerfile_exists == 'true'
run: |
version=$(cat ${{ matrix.package_dir }}/VERSION)
tag=polusai/${{ matrix.package_name }}:${version}
echo "tag will be ${tag}"
echo "tag=${tag}" >> $GITHUB_OUTPUT
- name: Docker | Setup Buildx
uses: docker/setup-buildx-action@v3
- name: Docker | Check if Image exists
if: env.dockerfile_exists == 'true'
run: |
tag=${{ steps.docker_tag.outputs.tag }}
docker pull ${tag} > /dev/null \
&& $(echo "::error::${tag} already exists on DockerHub" && exit 1) \
|| echo "success"
- name: Docker | Build Image
if: env.dockerfile_exists == 'true'
run: |
cp .gitignore ${{ matrix.package_dir }}/.dockerignore
cd "${{ matrix.package_dir }}"
if [ -f "build-docker.sh" ]; then
bash build-docker.sh
else
docker build . -t ${{ steps.docker_tag.outputs.tag }}
fi
bash build-docker.sh
# docker buildx build --platform linux/amd64,linux/arm64 -t ${tag} --push .
tests:
name: Test | ${{ matrix.package_name }}
needs: package-filter
if: ${{ needs.package-filter.outputs.num_packages > 0 }}
strategy:
fail-fast: false
matrix: ${{ fromJson(needs.package-filter.outputs.matrix) }}
runs-on: ubuntu-latest
steps:
- name: Checkout
uses: actions/checkout@v4
with:
lfs: true
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: '3.9'
- name: Install Conda
uses: conda-incubator/setup-miniconda@v2
- name: Run tests with conda
run: |
package_dir=${{ matrix.package_dir }}
cd $package_dir
if [ -f "environment.yml" ]; then
conda init bash
source ~/.bashrc
conda env create -f environment.yml
conda activate project_env
pip install -e ".[all]"
conda install pytest
python -X faulthandler -m pytest -v -p no:faulthandler
echo "conda_installed=true" >> $GITHUB_ENV
else
echo "conda_installed=false" >> $GITHUB_ENV
fi
- name: Install Poetry
uses: abatilo/actions-poetry@v2
- name: Run tests with poetry
if: env.conda_installed == 'false'
run: |
poetry config virtualenvs.create false
package_dir=${{ matrix.package_dir }}
cd $package_dir
poetry install
python -X faulthandler -m pytest -v -p no:faulthandler