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updated changelog and makereport for version 1.4.4
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RickGelhausen committed Sep 18, 2020
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3 changes: 2 additions & 1 deletion ChangeLog.md
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### version 1.4.4 (in progress, available on master branch) [Rick Gelhausen & Florian Eggenhofer](mailto:gelhausr@informatik.uni-freiburg.de) 27.07.2020
### version 1.4.4 [Rick Gelhausen & Florian Eggenhofer](mailto:gelhausr@informatik.uni-freiburg.de) 18.09.2020
* added overlap column to the overview table, to show whether an entry overlaps with an annotated gene.
* improved the handling of TE wildcards in excel scripts, allowing input combinations that were previously not possible.
* minor fix for mapping script that ensures the header is set correctly for the "mil" mapping.
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* improved gtf2gff3 script to use gene_biotype to find RNA features.
* improved start/stop gff files (including motifs and frames)
* added 15nt upstream of the start codon to each .xlsx table.
* updated reparation environment
* some code clean-up

### version 1.4.3 [Rick Gelhausen & Florian Eggenhofer](mailto:gelhausr@informatik.uni-freiburg.de) 15.05.2020
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2 changes: 1 addition & 1 deletion scripts/makereport.sh
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Expand Up @@ -5,7 +5,7 @@ idx=$1
timestamp=$(date +"%d-%m-%y")
echo "${timestamp}"

report="${idx}report_HRIBO1.4.3_${timestamp}"
report="${idx}report_HRIBO1.4.4_${timestamp}"

mkdir -p $report
mkdir -p "${report}/genome-browser/features/"
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