Seed banks as incidental fungi banks: fungal endophyte diversity in stored seeds of banana wild relatives

Script and data for Hill et al. (2021) Seed Banks as Incidental Fungi Banks: Fungal Endophyte Diversity in Stored Seeds of Banana Wild Relatives. Front. Microbiol. 12:643731. doi: 10.3389/fmicb.2021.643731

Main OTU classification and ecology analysis script: Musa_endo_analyses.r

Alignment file (with ambiguous regions excluded) of the markers RPB1, RPB2 and EF1α (including introns) for 130 taxa of Fusarium and related genera: Fusarium_130T_3loci_introns_excluded.phy

RAxML tree file: RAxML_bipartitions.Musa_fusarium_130T_3loci_introns