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Update notebooks to work with latest version of the precompiled Colab… #1554

Update notebooks to work with latest version of the precompiled Colab…

Update notebooks to work with latest version of the precompiled Colab… #1554

Triggered via push October 31, 2024 14:58
Status Failure
Total duration 29m 12s
Artifacts 5

docker-ci.yml

on: push
forward-flux-sampling
15m 57s
forward-flux-sampling
abf-alanine-dipeptide-openmm
10m 53s
abf-alanine-dipeptide-openmm
spectral-abf-alanine-dipeptide-openmm
4m 3s
spectral-abf-alanine-dipeptide-openmm
abf-tip3p-water-ase
5m 31s
abf-tip3p-water-ase
metad-alanine-dipeptide-openmm
4m 4s
metad-alanine-dipeptide-openmm
alanine-dipeptide-openmm-mpi
8m 26s
alanine-dipeptide-openmm-mpi
cv-pucker-openmm-unbiased
3m 31s
cv-pucker-openmm-unbiased
cv-ermsd-openmm-unbiased
4m 55s
cv-ermsd-openmm-unbiased
cv-ermsd-cg-openmm-unbiased
3m 45s
cv-ermsd-cg-openmm-unbiased
alanine-dipeptide-string
8m 18s
alanine-dipeptide-string
openmm-nacl-metad-displacement
3m 39s
openmm-nacl-metad-displacement
metad-hoomd
5m 32s
metad-hoomd
funn-butane-hoomd
4m 49s
funn-butane-hoomd
cff-butane-hoomd
4m 4s
cff-butane-hoomd
harmonic-bias-hoomd
4m 21s
harmonic-bias-hoomd
unbiased-hoomd
4m 1s
unbiased-hoomd
umbrella-integration-hoomd
3m 26s
umbrella-integration-hoomd
improved-string-hoomd
3m 31s
improved-string-hoomd
umbrella-integration-hoomd-mpi
3m 27s
umbrella-integration-hoomd-mpi
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1 error and 21 warnings
cv-pucker-openmm-unbiased
Process completed with exit code 1.
build
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, docker/setup-buildx-action@v2, docker/build-push-action@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
umbrella-integration-hoomd
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
umbrella-integration-hoomd-mpi
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
cv-pucker-openmm-unbiased
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
improved-string-hoomd
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
openmm-nacl-metad-displacement
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
cv-ermsd-cg-openmm-unbiased
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
cff-butane-hoomd
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
unbiased-hoomd
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
metad-alanine-dipeptide-openmm
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
spectral-abf-alanine-dipeptide-openmm
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
harmonic-bias-hoomd
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
funn-butane-hoomd
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
cv-ermsd-openmm-unbiased
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
abf-tip3p-water-ase
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
metad-hoomd
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
alanine-dipeptide-string
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
alanine-dipeptide-openmm-mpi
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
abf-alanine-dipeptide-openmm
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "harmonic-hist.pdf", "pysages", "spline-string-plots", "umbrella-integration-mpi-plots", "umbrella-integration-plots". Please update your workflow to use v4 of the artifact actions. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
forward-flux-sampling
The following actions use a deprecated Node.js version and will be forced to run on node20: docker/setup-buildx-action@v2, actions/download-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/

Artifacts

Produced during runtime
Name Size
harmonic-hist.pdf Expired
11.3 KB
pysages Expired
3.44 GB
spline-string-plots Expired
12.1 KB
umbrella-integration-mpi-plots Expired
23.6 KB
umbrella-integration-plots Expired
23.1 KB