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GATK4 Singularity container and fixes for ROI #601
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maxulysse
approved these changes
Jun 19, 2018
jherrero
referenced
this pull request
in UCL-BLIC/Sarek_v2.2.1
Apr 11, 2019
GATK4 Singularity container and fixes for ROI
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The official GATK4 docker container is pretty bloated, so I made a Singularity-only one that is about 10% in size of the version created from docker.
Also this PR contains hotfixes for the ROI script to make it work correctly with the CLC viewer.