Merge pull request #2 from Lessnic/develop

16.1-beta

.gitignore

@@ -1,3 +1,4 @@
 .gradle
 .idea
-/build
+/build
+/logs

README.md

@@ -1,11 +1,25 @@
 # Computer and algorithm interaction simulation software (CAISS).
-Simulation software contains inside its core implemented with respect to mathematical model
-representations of architecture and algorithm. Intended for simulation their interactions and
-listing results for optimization purposes. It, in addition, includes a few benchmarks to comparison
-with a real performance with simulation results for improving and testing purposes.
+The simulation software contains inside its core representations of 
+architecture and algorithm implemented with respect to a derived in 
+a related PhD thesis mathematical model. It intended for simulation 
+architecture and algorithm interactions and listing the results for 
+optimization purposes. It, in addition, includes a few benchmarks for 
+comparison a real performance with simulation results for improving and 
+testing purposes.   
 
 ### Running in IDEA
-Just select the runnable classes and run as a console Java application.
+First - import the gradle project. Then select the desired runnable 
+class and run as a console Java application.
+**benchmarks.ants.run.AntsRunner
+benchmarks.matrixes.ManualBenchmarksRunner**
+
+The next runnable needs a JMH plugin and annotations processing on.
+**benchmarks.matrixes.JMHBenchmarksRunner** 
+
+### Running via Gradle
+gradle -jmh command runs the 
+**benchmarks.matrixes.JMHBenchmarksRunner** 
+without additional settings.
 
 # License
 GNU GENERAL PUBLIC LICENSE Version 3.

build.gradle

@@ -40,7 +40,7 @@ jmh.jmhVersion = "1.12"
 // the main class where other test classes should be registered.
 tasks.jmh.main = "benchmarks.control.JMHBenchmarksRunner"
 
-//noinspection GroovyAssignabilityCheck - false, while it works don"t touch it
+//noinspection GroovyAssignabilityCheck - false, while it works don't touch it
 sourceSets {
     main {
         java {
@@ -59,15 +59,28 @@ jmhJar {
     append "META-INF/CompilerHints"
 }
 
+task fatJar(type: Jar) {
+    manifest {
+        //noinspection GroovyAssignabilityCheck - false, while it works don't touch it
+        attributes "Main-Class": "benchmarks.ants.run.AntsRunner"
+    }
+    baseName = project.name + "-all"
+    from { configurations.compile.collect { it.directory ? it : zipTree(it) } }
+    with jar
+}
+
 dependencies {
     apt "org.openjdk.jmh:jmh-generator-annprocess:${jmh.jmhVersion}" // jmh benchmarking
 
     compile "org.openjdk.jmh:jmh-core:${jmh.jmhVersion}"// jmh
+
     compile "org.slf4j:slf4j-api:1.7.+"                 // logging-api
+    // compile "org.slf4j:slf4j-ext:1.7.+"              // manual performance measures
     compile "ch.qos.logback:logback-classic:1.1.+"      // logger
+
     compile "com.google.code.findbugs:jsr305:3.0.+"     // QA annotations
     compile "com.google.guava:guava:19.+"               // commons lib
 
-    testCompile "junit:junit:4.+"                   // main tests lib
-    testCompile "org.mockito:mockito-core:1.10.+"    // mocks
+    testCompile "junit:junit:4.+"                       // main tests lib
+    // testCompile "org.mockito:mockito-core:1.10.+"    // mocks
 }

src/main/java/META-INF/MANIFEST.MF

@@ -0,0 +1,6 @@
+Manifest-Version: 1.0
+Class-Path: slf4j-api-1.7.21.jar logback-core-1.1.7.jar jopt-simple-4.
+ 6.jar logback-classic-1.1.7.jar jmh-core-1.12.jar jsr305-3.0.1.jar gu
+ ava-19.0.jar commons-math3-3.2.jar
+Main-Class: benchmarks.ants.run.AntsRunner
+