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New modules developed for Soil and Water Assessment Tool (SWAT) revision 664

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6 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

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New modules for SWAT

Macropore and pesticide transport to tile drains

New module : Macropore and drain discharge and pesticide transport

Original author : Shenglan Lu

Github link : https://github.com/ShengLanLuKPHDK/SWATAU

Branch name : feature/drainPST

SWAT code base version : 664

New source files

Filename(s) Key content/functionality of subroutine(s) comments
macroflow.f90 computes preferential flow from macropores
macropst.f90 computes soluble pesticide that leach to the tile drains via macropore
macrosed.f90 computes sediment transport to the tile drains via macropore
macrosed_pst.f90 computes sediment bound pesticide that leach to the tile drains via macropore
pestdrain.f90 computes soluble pesticide lost from tile drain
tilesplit.f90 computes fraction of the tile drain flow from each soil layer

Changes to existing source files

Filename(s) Key content/functionality added to existing subroutine(s) comments
allocate_parms.f allocate new parameters
layersplit.f determine the soil layer number of the wet layer
modparm.f add new parameters
percmain.f call macroflow and tilesplit module
pestlch.f calculate soluble pesticide concentration in soil, call macropst and pestdrain module.
pesty.f call macrosed_pst module
readbsn.f read new input parameters, including calibration parameters and flags to turn on pestdrain and macropore overwrite original swat bacterial parameters
sim_initday.f reset variables daily
soil_phys.f compute maximum detachable sediment pool for macropore sediment
subbasin.f call macrosed module
sumv.f add macropore sediment to sediment yield, summarize pesticide from tile drains
varinit.f initialize variables
virtual.f route tile drain pesticide to rivers
zero0.f initialize variables

New model parameters

Parameter name(s) Replacing which existing parameter in which file* incl. on/off switches comments
macro_fr WDPQ in basin.bsn fraction of saturated soil water content, condisiton for macropre onset (ranging from 0-1)
dep_wet WGPQ in basin.bsn depth of wet layers (range depend on input soil depth)
kr WDLPQ in basin.bsn macropore sediment replenishment rate coefficient (not calibrated, last value 4)
filt WGLPQ in basin.bsn macropore sediment filtering when reaching tile drains (ranging 0-1)
k_theta WDPS in basin.bsn Michaelis-Menton half-saturation constant for the macropore flow fraction (default value 0.5, ranging 0-1)
percot wgps in basin.bsn soluble pesticide concentration in macropore and tile drain flow (similar concept with percop for surface runoff) (ranging from 0-1)
ifast new line at the end of bansin.bsn switch for macropore module, 0 off 1 on
ipest new line at the end of bansin.bsn switch for soluble pesticide leaching module, 0 off 1 on

*for the purpose of SWATCUP calibration

Soluble reactive phosphorus (SRP) transport from tile drains

New module : Soluble phosphorus transport from tile drains

Original author : Shenglan Lu

Github link : https://github.com/ShengLanLuKPHDK/SWATAU

Branch name : feature/drainP

SWAT code base version : 664

New source files

Filename(s) Key content/functionality of subroutine(s) comments
soilPout.f90 sum soil P for whole soil profile and print soil P budget
soilplch.f90 compute soluble P leaching, transport in surface runoff, tile drains and lost from soil profile use soil salinity input (sol_ec in .chm) for the phosphorus bounding material (Alox + Feox)
tilqsplit.f90 computes fraction of the tile drain flow from each soil layer

Changes to existing source files

Filename(s) Key content/functionality added to existing subroutine(s) comments
allocate_parms.f allocate new parameters
header.f add header tile P in daily hru level output
hruday.f90 add tilep output at hru level, call soilPout module
hrumon.f route tile p at monthly hru level overwrite crackflow output
modparm.f add new parameters
percmain.f call tilesplit module
readbsn.f read in new input parameters for calibration and flag for drainP overwrite swat bacterial parameter
readfile.f create soil P content (soilP.out) and soil P budget output file(soilPbudget.out) only daily output
readyr.f correct point source input when point source input starting year is later than simulation starting year otherwise the point source is not loaded
sim_initday.f initialize subbasin level tile p
subaa.f sum soluble p from tile drains and ground water
subbasin.f call solplch module
submon.f sum soluble p from tile drains and ground water
subyr.f sum soluble p from tile drains and ground water
sumv.f sum soluble p from surface runoff, tile drains and ground water
varinit.f initialize variables
virtual.f route soluble p from tile drains to the stream
zero0.f initialize variable

New model parameters

Parameter name(s) Replacing which existing parameter in which file* incl. on/off switches comments
k_langmuir WDPQ in basin.bsn Langmuir adsorption constant (l mg-1) (range 0.5-2.4)
Qmax_beta WGPQ in basin.bsn Maximum adsorption fraction (range 0.06-0.23)
itilep new line at the end of the basin.bsn file switch for drainP module, 0 off 1 on

*for the purpose of SWATCUP calibration

Macrophyte growth in the streams

Notice: Benthic sediment nutirent dynamics and interaction with water colum not tested

New module : Macrophytes in SWAT rivers

Original author : Shenglan Lu

Github link : https://github.com/ShengLanLuKPHDK/SWATAU

Branch name : feature/macrophyte

SWAT code base version : 664

New source files

Filename(s) Key content/functionality of subroutine(s) comments
bedsediment.f90 computes P and N in river benthic sediment
macrophyte.f90 computes in-stream macrophyte growth also change mannings N

Changes to existing source files

Filename(s) Key content/functionality added to existing subroutine(s) comments
allocate_parms.f allocate new parameters
modparm.f add new parameters
rchinit.f initialize variable for sediment resuspension (rchdy(61, jrch))
readbsn.f flag for macrophyte growth and maximum solar radiation
readpnd.f basin level input for benthic sediment parameters and macrophyte growth
readrte.f initialize sediment P and P values Not complete
route.f reset sediment resuspension, call macrophyte and bedsediment module
rtday.f assign hydraulic radius for each channel
rthsed.f initialize variable for sediment resuspension (rchdy(61, jrch))
rtout.f write macrophyte biomass and sediment resuspension in the output overwrite reacted pesticide in swat
rtsed.f assign sediment resuspension
rtsed_bagnold.f assign sediment resuspension
rtsed_kodatie.f assign sediment resuspension
rtsed_Molinas_Wu.f assign sediment resuspension
rtsed_yandsand.f assign sediment resuspension
sim_initday.f reset variables
zero.f initialize variables

New model parameters

Parameter name(s) Replacing which existing parameter in which file* incl. on/off switches comments
k_n_m PND_PSA in .pnd file Michaelis-Menton half-saturation constant for nitrogen for macrophyte growth (mg N g-2) (range 0.01 -0.03)
k_p_m PND_PVOL in .pnd file Michaelis-Menton half-saturation constant for phosphor for macrophyte growth (mg P g-2) (range 0.006 � 0.03)
SefSma PND_ESA in .pnd file Self-shading for macrophyte growth (g DW m-2) (range 10-30)
death PND_EVOL in .pnd file Death rate due to flow (range 0.008-0.015)
grmax PND_VOL in .pnd file Macrophyte growth rate at 20 °C (range 0.4-0.7)
minDeath PND_ORGN in .pnd file Minimum death rate due to respiration (range 0.01-0.04)
max_biomass PND_ORGP in .pnd file Maximum macrophyte biomass within a stream (g DW m -2) (range 220-300)
difpo4 PND_SED in .pnd file Never calibrated or initialized. Mol soluble reactive phosphorus diffusion constant (m-2day-1)
difno3 PND_NSED in .pnd file Never calibrated or initialized. Mol NO3 diffusion constant (m-2day-1)
diffnh4 PND_K in .pnd file Never calibrated or initialized. Mol NH4 diffusion constant (m-2day-1)
minrate IFLOD1 in .pnd file Never calibrated or initialized. Nitrogen mineralization rate
nitrate IFLOD2 in .pnd file Never calibrated or initialized. Nitrogen nitrification rate
pfr PSETLP1 in .pnd file Never calibrated or initialized. Fraction of phosphorus in macrophyte
nfr PSETLP2 in .pnd file Never calibrated or initialized. Fraction of nitrogen in macrophyte
nh4sed NSETLP1 in .pnd file Never calibrated or initialized. Initial amount of ammonia in river bed sediment porus water
no3sed NSETLP2 in .pnd file Never calibrated or initialized. Initial amount of nitrate in river bed sediment porus water
srpsed CHLAP in .pnd file Never calibrated or initialized. Initial amount of solute reactive phosphuros in bed sediment porus water
kd SECCIP in .pnd file Never calibrated or initialized. Ability of sediment absorbing phosphorus from surrounding substance
ma_biomass PND_NO3 in .pnd file Never calibrated or initialized. Initial macrophyte biomass
imacrophyte new line at the end of basin.bsn switch for macrophyte module, 0 off 1 on
radmax new line at the end of basin.bsn maximum solar radiation, input parameter. Difficult to determine during SWAT simulation, because swat does not read all weather input data before simulation.

*for the purpose of SWATCUP calibration

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