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1. SLaPMapper SLaPMapper Public

   Identifying and quantifying spliced-leader addition and polyadenylation site usage in kinetoplastid genomes

   Perl 1

2. geCAI geCAI Public

   MCMC method for estimating geCAI codon weights from CDS and mRNA abundance data

   Perl 1

3. STAG STAG Public

   Forked from davidemms/STAG

   STAG: Species Tree from All Genes

   Python

4. Simple_evolutionary_dynamics_simulator Simple_evolutionary_dynamics_simulator Public

   A simple script to obtain fixation probabilities and times in a finite population with random mating given drift and selection

   Perl

5. CodonFinder CodonFinder Public

   Codon optimisation by a fairly straightforward evolutionary algorithm optimising codon translation efficiency, codon positioning, and disorder

   Perl