Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[sub]feat: add function events #714

Merged
merged 26 commits into from
Sep 19, 2023
Merged

Conversation

guilhem-barthes
Copy link
Contributor

@guilhem-barthes guilhem-barthes commented Aug 23, 2023

Companion PR

Description

Add function events, used now we decoupled the building of the function with the execution of the compute task. For that it add a status field on the Function. It also includes another PR (merged here), to have functions build logs working again.

In a future PR, we will change the compute task execution to avoid having to wait_for_function_built in compute_task()

Fixes FL-1160

How has this been tested?

As this is going to be merged on a branch that is going to be merged to a POC branch, we use MNIST as a baseline of a working model. We will deal with failing tests on the POC before merging on main.

Checklist

  • changelog was updated with notable changes
  • documentation was updated

@guilhem-barthes

This comment was marked as outdated.

@Owlfred

This comment was marked as outdated.

@guilhem-barthes

This comment was marked as outdated.

@Owlfred

This comment was marked as outdated.

@guilhem-barthes

This comment was marked as outdated.

@Owlfred

This comment was marked as outdated.

@linear
Copy link

linear bot commented Aug 24, 2023

FL-1160 Add function event

Context

Statuses:

  • CREATED

  • BUILDING

  • READY

  • + failures

    Tranfer these statuses through the orchestrator.

    Change

Specification

Acceptance criteria

@guilhem-barthes guilhem-barthes marked this pull request as ready for review August 24, 2023 14:40
@guilhem-barthes guilhem-barthes requested a review from a team as a code owner August 24, 2023 14:40
@guilhem-barthes

This comment was marked as outdated.

@Owlfred

This comment was marked as outdated.

@guilhem-barthes guilhem-barthes changed the title feat: add function events [sub]feat: add function events Aug 24, 2023
@guilhem-barthes

This comment was marked as outdated.

@Owlfred

This comment was marked as outdated.

@guilhem-barthes

This comment was marked as outdated.

@Owlfred

This comment was marked as outdated.

@guilhem-barthes

This comment was marked as outdated.

@Owlfred

This comment was marked as outdated.

@guilhem-barthes

This comment was marked as outdated.

@Owlfred

This comment was marked as outdated.

@guilhem-barthes

This comment was marked as outdated.

@Owlfred

This comment was marked as outdated.

@guilhem-barthes guilhem-barthes marked this pull request as ready for review September 13, 2023 15:00
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

if asset_type == failure_report_pb2.FAILED_ASSET_FUNCTION:
# Needed as this field is only in ComputeTask
compute_task_key = ComputeTask.objects.values_list("key", flat=True).get(function_id=asset_key)
Copy link
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

I think we can have Model.MultipleObjectsReturned exception here, because several compute tasks can be linked to the same function.

Copy link
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

We probably should use rather iterate on the queryset (ensuring that it's not empty) to update all relevant CT status

Copy link
Contributor Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Filtering on status STATUS_DOING & STATUS_TODO

asset_class = ComputeTask

try:
asset = self.get_asset(request, report.key, channel_name, asset_class)
Copy link
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Shall we eventually (not now) refactor that to use PermissionMixin.download_file?

Copy link
Contributor Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

yes we should !

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
SdgJlbl pushed a commit to Substra/orchestrator that referenced this pull request Sep 19, 2023
## Companion PR

- Substra/substra-backend#714

## Description

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the `Function`. It also includes another PR (merged here), to have
functions build logs working again.

Fixes FL-1160

## How has this been tested?

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

## Checklist

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Signed-off-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: guilhem-barthes <guilhem-barthes@users.noreply.github.com>
@SdgJlbl SdgJlbl merged commit 79b00b9 into poc-decoupled-builder Sep 19, 2023
3 of 5 checks passed
@SdgJlbl SdgJlbl deleted the feat/add-function-events branch September 19, 2023 07:59
guilhem-barthes added a commit that referenced this pull request Oct 6, 2023
- Substra/orchestrator#263

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the Function. It also includes another PR (merged here), to have
functions build logs working again.

In a future PR, we will change the compute task execution to avoid
having to wait_for_function_built in compute_task()

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>
guilhem-barthes added a commit that referenced this pull request Oct 6, 2023
- Substra/orchestrator#263

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the Function. It also includes another PR (merged here), to have
functions build logs working again.

In a future PR, we will change the compute task execution to avoid
having to wait_for_function_built in compute_task()

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>
guilhem-barthes added a commit that referenced this pull request Oct 6, 2023
- Substra/orchestrator#263

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the Function. It also includes another PR (merged here), to have
functions build logs working again.

In a future PR, we will change the compute task execution to avoid
having to wait_for_function_built in compute_task()

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>
thbcmlowk pushed a commit to Substra/orchestrator that referenced this pull request Oct 11, 2023
- Substra/substra-backend#714

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the `Function`. It also includes another PR (merged here), to have
functions build logs working again.

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Signed-off-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: guilhem-barthes <guilhem-barthes@users.noreply.github.com>
thbcmlowk pushed a commit that referenced this pull request Oct 11, 2023
- Substra/orchestrator#263

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the Function. It also includes another PR (merged here), to have
functions build logs working again.

In a future PR, we will change the compute task execution to avoid
having to wait_for_function_built in compute_task()

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>
thbcmlowk pushed a commit to Substra/orchestrator that referenced this pull request Oct 11, 2023
- Substra/substra-backend#714

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the `Function`. It also includes another PR (merged here), to have
functions build logs working again.

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Signed-off-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: guilhem-barthes <guilhem-barthes@users.noreply.github.com>
thbcmlowk pushed a commit that referenced this pull request Oct 11, 2023
- Substra/orchestrator#263

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the Function. It also includes another PR (merged here), to have
functions build logs working again.

In a future PR, we will change the compute task execution to avoid
having to wait_for_function_built in compute_task()

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>
SdgJlbl pushed a commit to Substra/orchestrator that referenced this pull request Oct 20, 2023
- Substra/substra-backend#714

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the `Function`. It also includes another PR (merged here), to have
functions build logs working again.

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Signed-off-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: guilhem-barthes <guilhem-barthes@users.noreply.github.com>
SdgJlbl added a commit that referenced this pull request Oct 20, 2023
- Substra/orchestrator#263

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the Function. It also includes another PR (merged here), to have
functions build logs working again.

In a future PR, we will change the compute task execution to avoid
having to wait_for_function_built in compute_task()

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>
SdgJlbl pushed a commit to Substra/orchestrator that referenced this pull request Oct 20, 2023
- Substra/substra-backend#714

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the `Function`. It also includes another PR (merged here), to have
functions build logs working again.

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Signed-off-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: guilhem-barthes <guilhem-barthes@users.noreply.github.com>
thbcmlowk pushed a commit to Substra/orchestrator that referenced this pull request Oct 20, 2023
- Substra/substra-backend#714

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the `Function`. It also includes another PR (merged here), to have
functions build logs working again.

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Signed-off-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: guilhem-barthes <guilhem-barthes@users.noreply.github.com>
thbcmlowk pushed a commit to Substra/orchestrator that referenced this pull request Oct 24, 2023
- Substra/substra-backend#714

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the `Function`. It also includes another PR (merged here), to have
functions build logs working again.

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Signed-off-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: guilhem-barthes <guilhem-barthes@users.noreply.github.com>
thbcmlowk pushed a commit that referenced this pull request Oct 24, 2023
- Substra/orchestrator#263

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the Function. It also includes another PR (merged here), to have
functions build logs working again.

In a future PR, we will change the compute task execution to avoid
having to wait_for_function_built in compute_task()

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>
SdgJlbl added a commit that referenced this pull request Oct 25, 2023
* feat: decouple image builder from worker

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>

* fix: update skaffold config

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* feat: add `ServiceAccount` and modify role

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* fix: improve `wait_for_image_built`

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* feat: build image in new pod

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* chore: rename `deployment-builder.yaml` to `stateful-builder.yaml`

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* chore: rename `stateful-builder.yaml` to `statefulset-builder.yaml`

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* chore: centralize params

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* feat: create `BuildTask`

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* feat: move some values to `builder` module

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* feat: move more code to `builder`

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* fix: remove TaskProfiling as Celery task + save Entrypoint in DB

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>

* fix: extract entrypoint from registry

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>

* fix: make doc for helm chart

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>

* feat: build function at registration (#707)

<!-- Please reference issue if any. -->

<!-- Please include a summary of your changes. -->

<!-- Please describe the tests that you ran to verify your changes.  -->

- [ ] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>

* feat: share images between backends (#708)



Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>

* chore: update helm worklfow

Signed-off-by: ThibaultFy <50656860+ThibaultFy@users.noreply.github.com>

* chore: add .DS_Store to gitignore

Signed-off-by: ThibaultFy <50656860+ThibaultFy@users.noreply.github.com>

* chore: rm DS_Store

Signed-off-by: ThibaultFy <50656860+ThibaultFy@users.noreply.github.com>

* chore: rm .DS_Store

Signed-off-by: ThibaultFy <50656860+ThibaultFy@users.noreply.github.com>

* [sub]fix: add missing migration poc (#728)

## Description

Add a migration missing in the poc. 
This migration alters two things:

-  modify `ComputeTaskFailureReport.logs` 
-  modify `FunctionImage.file`

This migration has been generated automatically with `make migrations`

## How has this been tested?

<!-- Please describe the tests that you ran to verify your changes.  -->

## Checklist

- [ ] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* [sub]feat: add function events (#714)

- Substra/orchestrator#263

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the Function. It also includes another PR (merged here), to have
functions build logs working again.

In a future PR, we will change the compute task execution to avoid
having to wait_for_function_built in compute_task()

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>

* [sub]fix(app/orchestrator/resources): FunctionStatus.FUNCTION_STATUS_CREATED -> FunctionStatus.FUNCTION_STATUS_WAITING (#742)

# Issue

Backend FunctionStatus are not aligned with [orchestrator
definitions](https://github.com/Substra/orchestrator/blob/poc-decoupled-builder/lib/asset/function.proto#L29-L36).
In particular, `FunctionStatus.FUNCTION_STATUS_CREATED` leading to the
following error:

```txt
ValueError: 'FUNCTION_STATUS_WAITING' is not a valid FunctionStatus
```

## Description

FunctionStatus.FUNCTION_STATUS_CREATED ->
FunctionStatus.FUNCTION_STATUS_WAITING

## How has this been tested?

Running Camelyon benchmark on
[poc-builder-flpc](https://substra.org-1.poc-builder-flpc.cg.owkin.tech/compute_plans/a420306f-5719-412b-ab9c-688b7bed9c70/tasks?page=1&ordering=-rank)
environment.

## Checklist

- [ ] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: Thibault Camalon <135698225+thbcmlowk@users.noreply.github.com>

* fix: builder using builder SA (#754)

* fix: builder using builder SA

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

* docs: changelog

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

---------

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

* fix: rebase changelog

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

* fix: adapt to pydantic 2.x.x (#758)

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

* [sub]fix(backend/image_transfert/encoder): update pydantic method (#763)

* fix(backend/image_transfert/encoder): update pydantic method

Signed-off-by: Thibault Camalon <135698225+thbcmlowk@users.noreply.github.com>

* fix(backend/image_transfer/decoder): parse_raw -> model_validate_json

Signed-off-by: Thibault Camalon <135698225+thbcmlowk@users.noreply.github.com>

---------

Signed-off-by: Thibault Camalon <135698225+thbcmlowk@users.noreply.github.com>

* [sub]chore: upgrade chart (#765)

* chore(charts): bump chart version

Signed-off-by: Thibault Camalon <135698225+thbcmlowk@users.noreply.github.com>

* chore(charts/substra-backend/CHANGELOG): bring back unreleased section

Signed-off-by: Thibault Camalon <135698225+thbcmlowk@users.noreply.github.com>

---------

Signed-off-by: Thibault Camalon <135698225+thbcmlowk@users.noreply.github.com>

* fix: post-rebase

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>

* chore: rationalize migrations

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>

* [sub]chore(builder): waitPostgresqlInitContainer (#764)

* fix: builder using builder SA (#754)

* fix: builder using builder SA

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

* docs: changelog

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

---------

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

* chore(charts/substra-backend/templates/statefulset-builder): add init-container waitPostgresqlInitContainer

Signed-off-by: Thibault Camalon <135698225+thbcmlowk@users.noreply.github.com>

---------

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Signed-off-by: Thibault Camalon <135698225+thbcmlowk@users.noreply.github.com>
Co-authored-by: Guilhem Barthés <guilhem.barthes@owkin.com>

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: ThibaultFy <50656860+ThibaultFy@users.noreply.github.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Signed-off-by: Thibault Camalon <135698225+thbcmlowk@users.noreply.github.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>
Co-authored-by: ThibaultFy <50656860+ThibaultFy@users.noreply.github.com>
Co-authored-by: Thibault Camalon <135698225+thbcmlowk@users.noreply.github.com>
SdgJlbl pushed a commit to Substra/orchestrator that referenced this pull request Oct 25, 2023
## Details 
- Substra/substra-backend#714

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the `Function`. It also includes another PR (merged here), to have
functions build logs working again.

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

## Companion PR

* orchestrator: #310
* backend: Substra/substra-backend#756
* frontend: Substra/substra-frontend#240
* substra-generator: owkin/substra-generator#131

## Misc
- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

## Description

<!-- Please reference issue if any. -->

<!-- Please include a summary of your changes. -->

## How has this been tested?

<!-- Please describe the tests that you ran to verify your changes.  -->

## Checklist

- [ ] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Signed-off-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Signed-off-by: thbcmlowk <thbcmlowk@users.noreply.github.com>
Co-authored-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Co-authored-by: guilhem-barthes <guilhem-barthes@users.noreply.github.com>
Co-authored-by: thbcmlowk <thbcmlowk@users.noreply.github.com>
guilhem-barthes added a commit that referenced this pull request Oct 25, 2023
- Substra/orchestrator#263

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the Function. It also includes another PR (merged here), to have
functions build logs working again.

In a future PR, we will change the compute task execution to avoid
having to wait_for_function_built in compute_task()

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>
guilhem-barthes added a commit that referenced this pull request Feb 8, 2024
- Substra/orchestrator#263

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the Function. It also includes another PR (merged here), to have
functions build logs working again.

In a future PR, we will change the compute task execution to avoid
having to wait_for_function_built in compute_task()

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>
guilhem-barthes added a commit that referenced this pull request Feb 12, 2024
- Substra/orchestrator#263

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the Function. It also includes another PR (merged here), to have
functions build logs working again.

In a future PR, we will change the compute task execution to avoid
having to wait_for_function_built in compute_task()

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>
guilhem-barthes added a commit that referenced this pull request Feb 12, 2024
* feat: decouple image builder from worker

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>

* fix: update skaffold config

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* feat: add `ServiceAccount` and modify role

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* feat: build image in new pod

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* chore: rename `deployment-builder.yaml` to `stateful-builder.yaml`

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* chore: rename `stateful-builder.yaml` to `statefulset-builder.yaml`

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* chore: centralize params

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* feat: create `BuildTask`

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* feat: move more code to `builder`

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* fix: remove TaskProfiling as Celery task + save Entrypoint in DB

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>

* feat: build function at registration (#707)

<!-- Please reference issue if any. -->

<!-- Please include a summary of your changes. -->

<!-- Please describe the tests that you ran to verify your changes.  -->

- [ ] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>

* feat: share images between backends (#708)



Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>

* chore: update helm worklfow

Signed-off-by: ThibaultFy <50656860+ThibaultFy@users.noreply.github.com>

* [sub]fix: add missing migration poc (#728)

## Description

Add a migration missing in the poc. 
This migration alters two things:

-  modify `ComputeTaskFailureReport.logs` 
-  modify `FunctionImage.file`

This migration has been generated automatically with `make migrations`

## How has this been tested?

<!-- Please describe the tests that you ran to verify your changes.  -->

## Checklist

- [ ] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* [sub]feat: add function events (#714)

- Substra/orchestrator#263

Add function events, used now we decoupled the building of the function
with the execution of the compute task. For that it add a status field
on the Function. It also includes another PR (merged here), to have
functions build logs working again.

In a future PR, we will change the compute task execution to avoid
having to wait_for_function_built in compute_task()

Fixes FL-1160

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>

* [sub]fix(app/orchestrator/resources): FunctionStatus.FUNCTION_STATUS_CREATED -> FunctionStatus.FUNCTION_STATUS_WAITING (#742)

# Issue

Backend FunctionStatus are not aligned with [orchestrator
definitions](https://github.com/Substra/orchestrator/blob/poc-decoupled-builder/lib/asset/function.proto#L29-L36).
In particular, `FunctionStatus.FUNCTION_STATUS_CREATED` leading to the
following error:

```txt
ValueError: 'FUNCTION_STATUS_WAITING' is not a valid FunctionStatus
```

## Description

FunctionStatus.FUNCTION_STATUS_CREATED ->
FunctionStatus.FUNCTION_STATUS_WAITING

## How has this been tested?

Running Camelyon benchmark on
[poc-builder-flpc](https://substra.org-1.poc-builder-flpc.cg.owkin.tech/compute_plans/a420306f-5719-412b-ab9c-688b7bed9c70/tasks?page=1&ordering=-rank)
environment.

## Checklist

- [ ] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: Thibault Camalon <135698225+thbcmlowk@users.noreply.github.com>

* fix: rebase changelog

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

* feat: decouple image builder from worker

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>

* feat: add `ServiceAccount` and modify role

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* feat: build function at registration (#707)

<!-- Please reference issue if any. -->

<!-- Please include a summary of your changes. -->

<!-- Please describe the tests that you ran to verify your changes.  -->

- [ ] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>

* feat: save status update in orc

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* feat: use status for build waiting

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* fix: re-add `container_image_exists`

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* fix: rebase errors

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* fix: format

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* fix: tests

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* fix: add `si` to building invokations

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* fix: tests

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* fix: apply feedback

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* fix: only import during typing

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* [sub]feat: modify computetask failure report (#727)

## Companion PR

- Substra/orchestrator#277
- Substra/substra-frontend#240

## Description

The aim is to allow registering failure reports not only for compute
task but for other kind of assets (for now, functions which are not
building as part of the execution of a compute task)

- Modifies `ComputeTaskFailureReport`:
    - renamed the model to `AssetFailureReport`
- renamed field `compute_task_key` to `asset_key` (as we can now have a
function key)
    - added field `asset_type` to provide 
- Updates protobuf reflecting the previous changes
- refactor `download_file` in `PermissionMixin` to provide mroe
flexibility (and decouple from DRF)
- create new `FailableTask` (Celery task):
  - centralize the logic to submit asset failure

## How has this been tested?

As this is going to be merged on a branch that is going to be merged to
a POC branch, we use MNIST as a baseline of a working model. We will
deal with failing tests on the POC before merging on main.

## Checklist

- [x] [changelog](../CHANGELOG.md) was updated with notable changes
- [ ] documentation was updated

---------

Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>

* feat: add config to run celery in tests

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

* feat: add tests

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

* fix: remove rebqse duplicate

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

* docs: changelog

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

* fix: adapt to pydantic 2.x.x

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

* fix: remove rebase artifacts

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

* fix: update to pydantic 2.x.x

Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>

---------

Signed-off-by: SdgJlbl <sarah.diot-girard@owkin.com>
Signed-off-by: Guilhem Barthes <guilhem.barthes@owkin.com>
Signed-off-by: ThibaultFy <50656860+ThibaultFy@users.noreply.github.com>
Signed-off-by: Guilhem Barthés <guilhem.barthes@owkin.com>
Signed-off-by: Thibault Camalon <135698225+thbcmlowk@users.noreply.github.com>
Co-authored-by: SdgJlbl <sarah.diot-girard@owkin.com>
Co-authored-by: ThibaultFy <50656860+ThibaultFy@users.noreply.github.com>
Co-authored-by: Thibault Camalon <135698225+thbcmlowk@users.noreply.github.com>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
api compute-engine documentation Improvements or additions to documentation
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants