Functions & work-flow
- ParameterSetup.m - UI to test & optimize tracker settings. Updated settings are stored in Settings.mat
- BatchTracker.m - UI to select videos for tracking, tracks videos, stores output in a datapath specified in makeSettings.m
- Tracker Analysis - Directory containing miscellaneous functions to further process tracker output:
- Main.m - Framework to call functions in directory
- getParams - Extract n parameters for m traces in a frame, returns a [m x n] sized matrix per frame.
- CleanTraces - Omit traces not meeting requirements (specified in makeAnalyseSettings.m), fit a polynomial trough raw traces
- DetectTouch - Measure distance between whiskers and objects, returns indices of points on traces touching an object
- FIG_ - returns a figure on data