Use core 2.27.0

[johnkerl]

[sc-59686]

[mojaveazure]

Please re-generate the docs by running Rscript -e "devtools::document()" from within the root of TileDB-R to restore the correct documentation for S4 subsetting methods (sub-tiledb_array, sub-tiledb_config and sub-tiledb_filter_list); running from within RStudio or using roxygen2::roxygenize() yields incorrect S4 method signatures in the docs

[johnkerl]

Please re-generate the docs by running Rscript -e "devtools::document()" from within the root of TileDB-R

@mojaveazure I did :|

If I did that wrongly I need to know how to do it rightly ...

[johnkerl]

If I did that wrongly I need to know how to do it rightly ...

Ah, I had done devtools::document() at the R prompt but had forgotten to isntead invoke it as

Rscript -e 'devtools::document()

-- my apologies!

[johnkerl]

@mojaveazure commit 4: 82db624

[mojaveazure]

When I run devtools::document() from Rscript, I see the corresponding Rd files change

paul@tiledb-ph:~/software/TileDB-R$ git branch
* kerl/core-2.27.0
  main
paul@tiledb-ph:~/software/TileDB-R$ git log -1 --oneline
6b76b505 (HEAD -> kerl/core-2.27.0, origin/kerl/core-2.27.0) Run devtools::document()
paul@tiledb-ph:~/software/TileDB-R$ lsb_release -a
No LSB modules are available.
Distributor ID: Ubuntu
Description:    Ubuntu 24.04.1 LTS
Release:        24.04
Codename:       noble
paul@tiledb-ph:~/software/TileDB-R$ Rscript -e 'getRversion()' -e 'packageVersion("devtools")' -e "devtools::document()"
[1] ‘4.4.2’
[1] ‘2.4.5’
ℹ Updating tiledb documentation
ℹ Loading tiledb
Writing sub-tiledb_config-ANY-method.Rd
Writing sub-tiledb_filter_list-ANY-method.Rd
Writing sub-tiledb_array-ANY-method.Rd
paul@tiledb-ph:~/software/TileDB-R$ git diff man/sub-tiledb_array-ANY-method.Rd
diff --git a/man/sub-tiledb_array-ANY-method.Rd b/man/sub-tiledb_array-ANY-method.Rd
index e623a169..3b5c6266 100644
--- a/man/sub-tiledb_array-ANY-method.Rd
+++ b/man/sub-tiledb_array-ANY-method.Rd
@@ -1,14 +1,14 @@
 % Generated by roxygen2: do not edit by hand
 % Please edit documentation in R/TileDBArray.R
-\name{[,tiledb_array,ANY,ANY,ANY-method}
-\alias{[,tiledb_array,ANY,ANY,ANY-method}
+\name{[,tiledb_array,ANY-method}
+\alias{[,tiledb_array,ANY-method}
 \alias{[,tiledb_array}
 \alias{[,tiledb_array-method}
 \alias{[,tiledb_array,ANY,tiledb_array-method}
 \alias{[,tiledb_array,ANY,ANY,tiledb_array-method}
 \title{Returns a TileDB array, allowing for specific subset ranges.}
 \usage{
-\S4method{[}{tiledb_array,ANY,ANY,ANY}(x, i, j, ..., drop = FALSE)
+\S4method{[}{tiledb_array,ANY}(x, i, j, ..., drop = FALSE)
 }
 \arguments{
 \item{x}{tiledb_array object}

[mojaveazure]

Oop, just saw your other comments. Yeah, must be done from Rscript invoked from the shell (Rscript.exe on Windows), not the R prompt. I've made sure this is noted in the Notion, but if the wording is unclear please let me know so we can clarify it

[mojaveazure]

LGTM assuming CI runs succesfully; thanks for taking care of this!