Feedstock license: BSD-3-Clause
Home: https://github.com/samtools/htslib
Package license: MIT
Summary: C library for high-throughput sequencing data formats.
Development: https://github.com/TileDB-Inc/m2w64-htslib-build
Documentation: http://www.htslib.org/
The conda binary m2w64-htslib bundles a pre-built htslib binary that was built under msys2. All dependencies are statically linked, with the exception of .DLLs provided by Windows. It is suitable for linking against in conda recipes that build using MSVC. It does not have libcurl support, so cannot be used with S3 or GCS.
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Installing m2w64-htslib from the tiledb channel can be achieved by adding tiledb to your channels with:
conda config --add channels tiledb
conda config --set channel_priority strict
Once the tiledb channel has been enabled, m2w64-htslib can be installed with conda:
conda install m2w64-htslib
or with mamba:
mamba install m2w64-htslib
It is possible to list all of the versions of m2w64-htslib available on your platform with conda:
conda search m2w64-htslib --channel tiledb
or with mamba:
mamba search m2w64-htslib --channel tiledb
Alternatively, mamba repoquery may provide more information:
# Search all versions available on your platform:
mamba repoquery search m2w64-htslib --channel tiledb
# List packages depending on `m2w64-htslib`:
mamba repoquery whoneeds m2w64-htslib --channel tiledb
# List dependencies of `m2w64-htslib`:
mamba repoquery depends m2w64-htslib --channel tiledb
If you would like to improve the m2w64-htslib recipe or build a new
package version, please fork this repository and submit a PR. Upon submission,
your changes will be run on the appropriate platforms to give the reviewer an
opportunity to confirm that the changes result in a successful build. Once
merged, the recipe will be re-built and uploaded automatically to the
tiledb channel, whereupon the built conda packages will be available for
everybody to install and use from the tiledb channel.
Note that all branches in the TileDB-Inc/m2w64-htslib-feedstock are
immediately built and any created packages are uploaded, so PRs should be based
on branches in forks and branches in the main repository should only be used to
build distinct package versions.
In order to produce a uniquely identifiable distribution:
- If the version of a package is not being increased, please add or increase
the
build/number. - If the version of a package is being increased, please remember to return
the
build/numberback to 0.