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TomKellyGenetics committed Jul 4, 2024
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2 changes: 1 addition & 1 deletion R/annotation.R
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Expand Up @@ -86,7 +86,7 @@ add_labels <- function(variable, categories, cex = par()$cex, col = par()$fg, he
#' @keywords plot graphics violin annotation
#'
#' @usage add_outliers(variable, categories, cutoff = 3,
#' fill = par()$bg, col = par()$fg, bars = par()$fg,
#' fill = par()$bg, col = par()$fg, bars = par()$fg, lwd = par()$lwd,
#' verbose = FALSE)
#' @rdname add_outliers
#' @importFrom stats sd
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32 changes: 25 additions & 7 deletions cran-comments.md
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@@ -1,4 +1,5 @@
## Test environments
* Windows 10 desktop R 4.3.3
* ubuntu 14.04 (on travis-ci), R 3.6.3, 4.0.0, dev
* MacOS 10.13.6 (on travis-ci), 4.0.0
* ubuntu 14.04 (on circle-ci), R 3.6.1
Expand All @@ -10,21 +11,38 @@
* CentOS 7 R 4.1.2
* CentOS 7 R 4.2.1

## R CMD check results
── R CMD check results ───────────────────── vioplot 0.5.0 ────
Duration: 59.3s

── R CMD check results ────────────── vioplot 0.4.0.9001 ────
Duration: 40s

0 errors ✓ | 0 warnings ✓ | 0 notes ✓
0 errors ✔ | 0 warnings ✔ | 0 notes ✔

R CMD check succeeded

## Updates
Minor bug fixes. Significant changes to documentation.

New feature for histograms.
New features (pilot release with limited API and documentation)

- adds function to annotate sample size per group
- adds function to plot outliers by standard deviation magnitude threshold

Updates to Violin plot

- enable angled axis labels with srt.axis
- pass axis aesthetic parameters from formula input

Documentation

- add demo of histogram plots (#19 by @Jadamso)
- updated vignettes for split histograms (#19 by @Jadamso)
- expands vignettes for annotated violins and annotated split violins

Bug fixes

- formula input detects group names but avoids overlapping axis labels

All changes expected to be backwards compatible without affecting reverse dependencies.
New experimental features are fully-documented with separate functions to
avoid problems with existing functions.

#NOTE
None.
2 changes: 1 addition & 1 deletion man/add_outliers.Rd

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