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v1.1.3#9

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daniprec merged 84 commits intomasterUCA-Datalab/covid-npi:masterfrom developUCA-Datalab/covid-npi:developCopy head branch name to clipboardJun 23, 2021

+954-681

Commits

Commits on May 11, 2021

• Merge branch 'develop' into feature/taxonomia-update

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• Update taxonomia path

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• Update score_item, remove unused items

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• Raise KeyError when column name is missing in taxonomia

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Commits on May 12, 2021

• Merge branch 'develop' into feature/taxonomia-update

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• Finish v1.1.2

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Commits on May 18, 2021

• Update score items: COM_cent, CUL_tor, CUL_zoo

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• Add comment about date parsing

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• preprocess format_hora can take ranges

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• Remove option to choose date_format in format_hora

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• Update .gitignore

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• Update .gitignore

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Commits on May 21, 2021

• format_hora fix AttributeError

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Commits on May 24, 2021

• Script warns when "provincia" column is empty

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Commits on May 27, 2021

• Merge pull request #3 from UCA-Datalab/feature/taxonomia-update

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• Initialize rho computation script

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• Add logging info in casos and mobility scripts

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• Update path to config in mobility

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• Rename functions and optimize compute_incidence_normed

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• Rename functions in mobility

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• Replace sum operations with average

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• Rename some inner variables

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• Compute rho

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• Docstring

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• Add provinces code to config

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• Reassing province codes to avoid duplicates

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• Code reassignation

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• Add more codes to reassign

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• Ensure dataframe index is named "date"

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Commits on May 28, 2021

• Improve config error messages

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Commits on Jun 1, 2021

• Add missing import in mongo module

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• Update combine script: remove some ambitos

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Commits on Jun 3, 2021

• Store dict of conditions

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• Store processed taxonomia

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• Sort taxonomia codes

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• Improve condicion_personas

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• Change += to append

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  b24dddb

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• Fix hora preprocessing

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• Set maximum ambito values to 1

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• Update RIN_afo

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Commits on Jun 8, 2021

• Update score ceremonias

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• Update score ceremonias (fix error)

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Commits on Jun 11, 2021

• Data of abreviations and population

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• Script to run preprocessing and update web

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• Include notebooks in gitignore

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  7ee3e68

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• Move datos to data

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• Rename guipuzkoa to guipuzcoa

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• Sort taxonomia by ambito and item

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• Ignore nivel educacion in medidas

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• Fix max computation in score items

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• Merge pull request #7 from UCA-Datalab/feature/dist_social

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Commits on Jun 14, 2021

• Ignore vscode folder

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Commits on Jun 17, 2021

• Update Dist Social item scoring

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• score_medidas is more complete

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• Avoid porcentaje below 0

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• Initialize test scripts

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• Update test function

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• Test do not store additional files

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• Integrate pytest in Github

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• Update pytest integration

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• runs on to ubuntu-latest

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• Add pytest to setup

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• Simplify pytest integration

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• Storing dictionary of conditions is optional

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• Use param path_out_condition

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• Remove files before storing new ones

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  9a5e7d7

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• Raise error when province is missing

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• Fix path in update script

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• Raise warning when percentage over 100 is found

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Commits on Jun 18, 2021

• pd.sum() do not replaces NaN values

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Commits on Jun 19, 2021

• Move regions dict to script

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• Add DICT_FILL_PROVINCIA to regions script

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• Store isles as whole unit

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• Function names

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Commits on Jun 20, 2021

• Split islas canarias

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• Docstring

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• Organize imports

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• Optimize imports

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• Improve debug msg in datastore

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Commits on Jun 21, 2021

• Update dictionaries

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• Assert percentages sum 1

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• Keep isles apart from provinces

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Commits on Jun 23, 2021

• Rename Tenerife as Santa Cruz de Tenerife

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• Improve test score medidas

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