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Improve MNH logging #1477

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Improve MNH logging #1477

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Replace current system of incidence/outcome logging for MNH modules in which all heavy lifting (i.e. calculation of incidence/mortality rates) is done in the analysis script. Now yearly rates will be outputted from logging events to make analysis scripts more readable and to reduce excess repeated coding within such scripts.

@joehcollins joehcollins marked this pull request as ready for review October 10, 2024 07:53
@joehcollins joehcollins requested review from tamuri and removed request for tamuri October 10, 2024 07:53
@joehcollins joehcollins marked this pull request as draft October 10, 2024 08:05
@joehcollins joehcollins marked this pull request as ready for review October 10, 2024 12:43
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