Added apptainer

UPHL-BioNGS · Feb 11, 2025 · 940357a · 940357a
1 parent b48da5b
commit 940357a
Showing 1 changed file with 11 additions and 0 deletions.
diff --git a/nextflow.config b/nextflow.config
@@ -166,6 +166,17 @@ profiles {
     apptainer.enabled       = false
     docker.runOptions       = '-u $(id -u):$(id -g)'
   }
+  apptainer {
+    singularity.enabled     = false
+    singularity.autoMounts  = false
+    conda.enabled           = false
+    docker.enabled          = false
+    podman.enabled          = false
+    shifter.enabled         = false
+    charliecloud.enabled    = false
+    apptainer.enabled       = true
+    apptainer.autoMounts    = true
+  }
   singularity {
     singularity.enabled     = true
     singularity.autoMounts  = true