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Cure threshold #2

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Cure threshold #2

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W-Mohammed
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This branch adds a vignette explaining how the cure threshold is implemented. The following plots are included in that vignette.

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The package is now ready for Jordan data and results.

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line 140 the parameter "df_survival_curves" reflect survival before the the time of threshold this is causing an error

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I can not reproduce the error, @Khader-Habash!

I have added two sets of tests, one for when the 'cure threshold' assumption is employed and one for when it is not. Both tests pass fine on my system.

I also changed the way the Markov trace is checked.

Can you pull the latest changes and run the tests on your machine using devtools::test()?

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W-Mohammed and others added 4 commits July 14, 2024 18:55
…ative survival multiplied by the percentage of the population alive at the time of the cure threshold.
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2 participants