Code

Code formatting#19

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Merged

aeverall merged 17 commits intomainWedge-lab/Gel_pan_cancer_signatures:mainfrom feat/code-from-gelWedge-lab/Gel_pan_cancer_signatures:feat/code-from-gelCopy head branch name to clipboardDec 31, 2024

+14,942-1,823

Commits

Commits on Dec 30, 2024

• combineSignatures scripts

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  4878a60

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• Moved pipelines

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• combinedSignatures

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• utils BH_threshold

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Commits on Dec 31, 2024

• Plotting scripts

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• sampleCuration

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• ignore data

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• Dependencies

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• signatureAssociations.nf readme

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• Code clean

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• Remove hardcoded paths

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• Compatible dependencies - I've tested these

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• R dependency handling

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• Ignore R

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• ruff formatting

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• Ruff formatting

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• Ruff formatting

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