grab snakemake_directory from either --profile, -s, or --snakefile args #1
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ekofman
reviewed
Oct 19, 2022
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| snakemake_directory = get_val_from_args(['snakefile', 's', 'profile']) | ||
| scripts_directory='{}/workflow_sailor/scripts/'.format(snakemake_directory) |
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I think changing this won't work... were you able to test this with all the use cases already?
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Yeah, we can go through it later today if you'll be in lab?
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