kbrannan_STAMP

Code repository for "Robust single-cell discovery of RNA targets of RNA binding proteins and ribosome"

Directories:

• bulk_rnaseq: Notebooks containing analysis for bulk STAMP data
• environments: text files containing software/versions for the kernels used to run analysis notebooks
• figures: Notebooks for figure generation
• nanopore: Notebooks containing analysis for nanopore STAMP data
• python_scripts: Python scripts used generally for analysis of STAMP data
• single_cell: Notebooks containing analysis for single cell STAMP data