Update set file path override and chunks logic - bugfix (#1051)

aces · Mar 15, 2024 · 25d9fb6 · 25d9fb6
1 parent 8b20077
commit 25d9fb6
Showing 1 changed file with 21 additions and 21 deletions.
diff --git a/python/lib/eeg.py b/python/lib/eeg.py
@@ -513,27 +513,27 @@ def fetch_and_insert_eeg_files(self, derivatives=False, detect=True):
                     eeg_file_info, eeg_file_data
                 )
 
-            if self.loris_bids_root_dir:
-                # If we copy the file in assembly_bids and
-                # if the EEG file was a set file, then update the filename for the .set
-                # and .fdt files in the .set file so it can find the proper file for
-                # visualization and analyses
-                if file_type == 'set':
-                    set_full_path = os.path.join(self.data_dir, eeg_path)
-                    width_fdt_file = True if 'fdt_file' in eeg_file_data.keys() else False
-
-                    file_paths_updated = utilities.update_set_file_path_info(set_full_path, width_fdt_file)
-                    if not file_paths_updated:
-                        message = "WARNING: cannot update the set file " + eeg_path + " path info"
-                        print(message)
-
-            inserted_eegs.append({
-                'file_id': physio_file_id,
-                'file_path': eeg_path,
-                'eegjson_file_path': eegjson_file_path,
-                'fdt_file_path': fdt_file_path,
-                'original_file_data': eeg_file,
-            })
+                if self.loris_bids_root_dir:
+                    # If we copy the file in assembly_bids and
+                    # if the EEG file was a set file, then update the filename for the .set
+                    # and .fdt files in the .set file so it can find the proper file for
+                    # visualization and analyses
+                    if file_type == 'set':
+                        set_full_path = os.path.join(self.data_dir, eeg_path)
+                        width_fdt_file = True if 'fdt_file' in eeg_file_data.keys() else False
+
+                        file_paths_updated = utilities.update_set_file_path_info(set_full_path, width_fdt_file)
+                        if not file_paths_updated:
+                            message = "WARNING: cannot update the set file " + eeg_path + " path info"
+                            print(message)
+
+                inserted_eegs.append({
+                    'file_id': physio_file_id,
+                    'file_path': eeg_path,
+                    'eegjson_file_path': eegjson_file_path,
+                    'fdt_file_path': fdt_file_path,
+                    'original_file_data': eeg_file,
+                })
 
         return inserted_eegs