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[imaging_non_minc_insertion] Missing lines in the log file #985

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Jul 10, 2023
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[imaging_non_minc_insertion] Missing lines in the log file #985

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14 changes: 6 additions & 8 deletions uploadNeuroDB/imaging_non_minc_insertion.pl
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Original file line number Diff line number Diff line change
Expand Up @@ -273,20 +273,18 @@ =head2 Methods
my $message = "\nlog dir is $log_dir and log file is $log_file.\n";
print $message if $verbose;

# open log file and write successful connection to DB
open( LOG, ">>", $log_file ) or die "\nError Opening $log_file.\n";
LOG->autoflush(1);
&logHeader();
$message = "\n==> Successfully connected to database\n";
print LOG $message;

# create Notify and Utility objects
my $notifier = NeuroDB::Notify->new(\$dbh);
my $utility = NeuroDB::MRIProcessingUtility->new(
$db, \$dbh, 0, $TmpDir, $log_file, $verbose, $profile
);


# open log file and write successful connection to DB
open( LOG, ">>", $log_file ) or die "\nError Opening $log_file.\n";
LOG->autoflush(1);
&logHeader();
$message = "\n==> Successfully connected to database\n";
print LOG $message;


##### Exit if the provided scanner ID does not refer to a valid scanner entry
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