Greg feedback on data_dir that could be different for different projects

aces · Mar 27, 2017 · ecb4a9b · ecb4a9b
1 parent 6d2d69c
commit ecb4a9b
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diff --git a/SQL/0000-00-03-ConfigTables.sql b/SQL/0000-00-03-ConfigTables.sql
@@ -134,6 +134,7 @@ INSERT INTO ConfigSettings (Name, Description, Visible, AllowMultiple, DataType,
 
 -- Loris-MRI/Imaging Pipeline options from the $profile (commonly "prod") file
 INSERT INTO ConfigSettings (Name, Description, Visible, AllowMultiple, Label, OrderNumber) VALUES ('imaging_pipeline', 'Imaging Pipeline settings', 1, 0, 'Imaging Pipeline', 12);
+INSERT INTO ConfigSettings (Name, Description, Visible, AllowMultiple, DataType, Parent, Label, OrderNumber) SELECT 'dataDirBasepath', 'Base Path to the data directory of Loris-MRI', 1, 0, 'text', ID, 'Loris-MRI Data Directory', 1 FROM ConfigSettings WHERE Name="imaging_pipeline";
 INSERT INTO ConfigSettings (Name, Description, Visible, AllowMultiple, DataType, Parent, Label, OrderNumber) SELECT 'prefix', 'Study prefix or study name', 1, 0, 'text', ID, 'Study Name', 1 FROM ConfigSettings WHERE Name="imaging_pipeline";
 INSERT INTO ConfigSettings (Name, Description, Visible, AllowMultiple, DataType, Parent, Label, OrderNumber) SELECT 'mail_user', 'User to be notified during imaging pipeline execution', 1, 0, 'text', ID, 'User to notify when executing the pipeline', 1 FROM ConfigSettings WHERE Name="imaging_pipeline";
 INSERT INTO ConfigSettings (Name, Description, Visible, AllowMultiple, DataType, Parent, Label, OrderNumber) SELECT 'get_dicom_info', 'Full path to get_dicom_info.pl', 1, 0, 'text', ID, 'Full path to get_dicom_info.pl script', 1 FROM ConfigSettings WHERE Name="imaging_pipeline";
@@ -222,6 +223,7 @@ SELECT 'Default API keys settings' as 'Filling Config table with default values'
 INSERT INTO Config (ConfigID, Value) SELECT ID, "S3cret" FROM ConfigSettings WHERE Name="JWTKey";
 
 SELECT 'Default Imaging Pipeline settings' as 'Filling Config table with default values';
+INSERT INTO Config (ConfigID, Value) SELECT ID, "/PATH/TO/DATA/location" FROM ConfigSettings cs WHERE cs.Name="Loris-MRI Data Directory";
 INSERT INTO Config (ConfigID, Value) SELECT ID, "project" FROM ConfigSettings cs WHERE cs.Name="prefix";
 INSERT INTO Config (ConfigID, Value) SELECT ID, "yourname\@example.com" FROM ConfigSettings cs WHERE cs.Name="mail_user";
 INSERT INTO Config (ConfigID, Value) SELECT ID, "/PATH/TO/get_dicom_info.pl" FROM ConfigSettings cs WHERE cs.Name="get_dicom_info";

diff --git a/SQL/Archive/17.1/2017-03-13_AddLorisMRIToConfig.sql b/SQL/Archive/17.1/2017-03-13_AddLorisMRIToConfig.sql
@@ -1,5 +1,6 @@
 -- Loris-MRI/Imaging Pipeline options from the $profile (commonly "prod") file
 INSERT INTO ConfigSettings (Name, Description, Visible, AllowMultiple, Label, OrderNumber) VALUES ('imaging_pipeline', 'Imaging Pipeline settings', 1, 0, 'Imaging Pipeline', 12);
+INSERT INTO ConfigSettings (Name, Description, Visible, AllowMultiple, DataType, Parent, Label, OrderNumber) SELECT 'dataDirBasepath', 'Base Path to the data directory of Loris-MRI', 1, 0, 'text', ID, 'Loris-MRI Data Directory', 1 FROM ConfigSettings WHERE Name="imaging_pipeline";
 INSERT INTO ConfigSettings (Name, Description, Visible, AllowMultiple, DataType, Parent, Label, OrderNumber) SELECT 'prefix', 'Study prefix or study name', 1, 0, 'text', ID, 'Study Name', 1 FROM ConfigSettings WHERE Name="imaging_pipeline";
 INSERT INTO ConfigSettings (Name, Description, Visible, AllowMultiple, DataType, Parent, Label, OrderNumber) SELECT 'mail_user', 'User to be notified during imaging pipeline execution', 1, 0, 'text', ID, 'User to notify when executing the pipeline', 1 FROM ConfigSettings WHERE Name="imaging_pipeline";
 INSERT INTO ConfigSettings (Name, Description, Visible, AllowMultiple, DataType, Parent, Label, OrderNumber) SELECT 'get_dicom_info', 'Full path to get_dicom_info.pl', 1, 0, 'text', ID, 'Full path to get_dicom_info.pl script', 1 FROM ConfigSettings WHERE Name="imaging_pipeline";
@@ -19,6 +20,7 @@ INSERT INTO ConfigSettings (Name, Description, Visible, AllowMultiple, DataType,
 
 
 -- default imaging_pipeline settings
+INSERT INTO Config (ConfigID, Value) SELECT ID, "/PATH/TO/DATA/location" FROM ConfigSettings cs WHERE cs.Name="Loris-MRI Data Directory";
 INSERT INTO Config (ConfigID, Value) SELECT ID, "project" FROM ConfigSettings cs WHERE cs.Name="prefix";
 INSERT INTO Config (ConfigID, Value) SELECT ID, "yourname\@example.com" FROM ConfigSettings cs WHERE cs.Name="mail_user";
 INSERT INTO Config (ConfigID, Value) SELECT ID, "/PATH/TO/get_dicom_info.pl" FROM ConfigSettings cs WHERE cs.Name="get_dicom_info";