HERA pipeline

Example directory structure for one of the HERACLES targets:

ngc2903/ |-- code | |-- bad_data.txt | |-- bad_data.txt~ | |-- cube_info_beta.idl | |-- default_ref.txt | |-- default_ref.txt~ | |-- first_red | |-- hi | |-- log.txt | |-- log.txt~ | |-- orig_data.txt | |-- orig_data.txt~ | |-- pipe_batch.pro | |-- pipe_batch.pro~ | |-- pixel_gains_beta.txt | |-- reports_poly2 | |-- test_data.txt | -- test_data.txt~ |-- cubes | |-- _beta | | |-- mask_blank_beta.fits | | |-- mask_line_beta.fits | | |-- ngc2903_beta.fits | | |-- ngc2903_beta_bright_map.fits | | |-- ngc2903_beta_mask.fits | | |-- ngc2903ang1_beta.fits | | |-- ngc2903ang1_beta_raw.coverage.fits | | |-- ngc2903ang1_beta_raw.fits | | |-- ngc2903ang1_beta_raw.nspec.fits | | |-- ngc2903ang2_beta.fits | | |-- ngc2903ang2_beta_raw.coverage.fits | | |-- ngc2903ang2_beta_raw.fits | | |-- ngc2903ang2_beta_raw.nspec.fits | | |-- noise_beta.fits | | -- temp.fits | |-- reference | -- windows |-- masks | |-- first_red | |-- hi | |-- reference | | |-- make_on_mask.pro | | |-- make_on_mask.pro~ | | -- ngc2903_on_mask.fits | -- windows | |-- make_line_mask.pro | |-- make_line_mask.pro~ | |-- ngc2903_hi_high.fits | |-- ngc2903_hi_low.fits | |-- ngc2903_line_high.fits | |-- ngc2903_line_low.fits | |-- ngc2903_loweredge_high.fits | |-- ngc2903_loweredge_low.fits | |-- ngc2903_mask.fits | |-- ngc2903_upperedge_high.fits | -- ngc2903_upperedge_low.fits |-- other_data | |-- first_red | | |-- ngc2903_mask.fits | | |-- ngc2903_prelim.fits | | -- ngc2903_prelim.heracles.fits | |-- hi | | |-- ngc2903_things_mom1.fits | | -- ngc2903_things_na.fits | -- reports_poly2 | |-- fft_ngc2903_13feb08.jpeg | |-- fft_ngc2903_16feb08.jpeg | |-- fft_ngc2903_17feb08.jpeg | |-- fft_ngc2903_21feb08.jpeg | |-- fft_ngc2903_27nov07.jpeg | |-- fft_specngc2903_13feb08.txt | |-- fft_specngc2903_16feb08.txt | |-- fft_specngc2903_17feb08.txt | |-- fft_specngc2903_21feb08.txt | |-- fft_specngc2903_27nov07.txt | |-- flag_noise_ngc2903_13feb08.jpeg | |-- flag_noise_ngc2903_16feb08.jpeg | |-- flag_noise_ngc2903_17feb08.jpeg | |-- flag_noise_ngc2903_21feb08.jpeg | |-- flag_noise_ngc2903_27nov07.jpeg | |-- flag_ripple_ngc2903_13feb08.jpeg | |-- flag_ripple_ngc2903_16feb08.jpeg | |-- flag_ripple_ngc2903_17feb08.jpeg | |-- flag_ripple_ngc2903_21feb08.jpeg | |-- flag_ripple_ngc2903_27nov07.jpeg | |-- flagging_ngc2903_13feb08.txt | |-- flagging_ngc2903_16feb08.txt | |-- flagging_ngc2903_17feb08.txt | |-- flagging_ngc2903_21feb08.txt | |-- flagging_ngc2903_27nov07.txt | |-- gain_ngc2903_13feb08.ps | |-- gain_ngc2903_16feb08.ps | |-- gain_ngc2903_17feb08.ps | |-- gain_ngc2903_21feb08.ps | |-- gain_ngc2903_27nov07.ps | |-- noise_report_beta.txt | |-- noise_vs_scale_beta.jpeg | |-- onoff_ngc2903_13feb08.jpeg | |-- onoff_ngc2903_16feb08.jpeg | |-- onoff_ngc2903_17feb08.jpeg | |-- onoff_ngc2903_21feb08.jpeg | -- onoff_ngc2903_27nov07.jpeg |-- reports | |-- fft_ngc2903_13feb08.jpeg | |-- fft_ngc2903_16feb08.jpeg | |-- fft_ngc2903_17feb08.jpeg | |-- fft_ngc2903_21feb08.jpeg | |-- fft_ngc2903_27nov07.jpeg | |-- fft_specngc2903_13feb08.txt | |-- fft_specngc2903_16feb08.txt | |-- fft_specngc2903_17feb08.txt | |-- fft_specngc2903_21feb08.txt | |-- fft_specngc2903_27nov07.txt | |-- flag_noise_ngc2903_13feb08.jpeg | |-- flag_noise_ngc2903_16feb08.jpeg | |-- flag_noise_ngc2903_17feb08.jpeg | |-- flag_noise_ngc2903_21feb08.jpeg | |-- flag_noise_ngc2903_27nov07.jpeg | |-- flag_ripple_ngc2903_13feb08.jpeg | |-- flag_ripple_ngc2903_16feb08.jpeg | |-- flag_ripple_ngc2903_17feb08.jpeg | |-- flag_ripple_ngc2903_21feb08.jpeg | |-- flag_ripple_ngc2903_27nov07.jpeg | |-- flagging_ngc2903_13feb08.txt | |-- flagging_ngc2903_16feb08.txt | |-- flagging_ngc2903_17feb08.txt | |-- flagging_ngc2903_21feb08.txt | |-- flagging_ngc2903_27nov07.txt | |-- gain_ngc2903_13feb08.ps | |-- gain_ngc2903_16feb08.ps | |-- gain_ngc2903_17feb08.ps | |-- gain_ngc2903_21feb08.ps | |-- gain_ngc2903_27nov07.ps | |-- noise_report_beta.txt | |-- noise_report_prev.txt | |-- noise_vs_scale_beta.jpeg | |-- onoff_ngc2903_13feb08.jpeg | |-- onoff_ngc2903_16feb08.jpeg | |-- onoff_ngc2903_17feb08.jpeg | |-- onoff_ngc2903_21feb08.jpeg | -- onoff_ngc2903_27nov07.jpeg -- spectra |-- _beta |-- _fake |-- _off1 |-- _off2 |-- ngc2903_13feb08_beta.processed.fits |-- ngc2903_16feb08_beta.processed.fits |-- ngc2903_17feb08_beta.processed.fits |-- ngc2903_21feb08_beta.processed.fits `-- ngc2903_27nov07_beta.processed.fits