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Releases: alchemab/parapred-pytorch

v1.0.2

20 Aug 21:44
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  • Migrate up to PyTorch 2.0.1, Python 3.10
  • Fix README as pointed out in #2

v1.0.1

26 Apr 09:22
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Updated docs for running Parapred on a batch of sequences. This is due to PyTorch's pack_padded_sequence function preferring length-sorted sequences.

The model's forward call also has an update to expect length-sorted sequences.

v1.0.0

23 Mar 11:45
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PyTorch implementation of Parapred with features such as:

  • Use of sigmoid activation as opposed to hard sigmoid (default)
  • JSON outputs
  • Paratyping [Richardson et al., 2021, mAbs]

At this moment, we have no plans to include code for training Parapred from scratch.