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plasmiddb_cge.faa
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plasmiddb_cge.faa
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>rep1_1_repE(pAMbeta1)_AF007787_1
MNIPFVVETVLHDGLLKYKFKNSKIRSITTKPGKSKGAIFAYRSKSSMIGGRGVVLTSEE
AIQENQDTFTHWTPNVYRYGTYADENRSYTKGHSENNLRQINTFFIDFDIHTAKETISAS
DILTTAIDLGFMPTMIIKSDKGYQAYFVLETPVYVTSKSEFKSVKAAKIISQNIREYFGK
SLPVDLTCNHFGIARIPRTDNVEFFDPNYRYSFKEWQDWSFKQTDNKGFTRSSLTVLSGT
EGKKQVDEPWFNLLLHETKFSGEKGLIGRNNVMFTLSLAYFSSGYSIETCEYNMFEFNNR
LDQPLEEKEVIKIVRSAYSENYQGANREYITILCKAWVSSDLTSKDLFVRQGWFKFKKKR
SERQRVHLSEWKEDLMAYISEKSDVYKPYLVTTKKEIREVLGIPERTLDKLLKVLKANQE
IFFKIKPGRNGGIQLASVKSLLLSIIKVKKEEKESYIKALTNSFDLEHTFIQETLNKLAE
RPKTDTQLDLFSYDTGX
>rep1_1_repE(pAMbeta1)_AF007787_2
XISLLLXKLCFMTACXSTNLKIVKFAQSLPSQVKAKGLFLRIAQNQAXLAVVVLFXLPRK
RFKKIKIHLHIGHPTFIVMERMQTKTVHTRKDILKTIXDKSIPSLLILIFTRQKKLFQQA
IFXQPLLIXVLCLLXLSNLIKVIKHILFXKRQSMXLQNQNLNLSKQPKXFRKISENILES
LCQLIXRVIILVLLAYQERTMXNFLILITVILSKNGKIGLSNKQIIRALLVQVXRFXAVQ
KAKNKXMNPGLISYCTKRNFQEKRVXXGVITSCLPSLXPTLVQAIQSKRANIICLSLIID
XINPXKKKKXSKLLEVPIQKTIKGLIGNTLPFFAKLGYQVIXPVKIYLSVKGGLNSRKKE
ANVNVFICQNGKKIXWLILAKKAMYTSLIXXRPKKRLEKCXAFLNGHXINCXRYXRRIRK
FSLRLNQEEMVAFNLLVLNHCCYRSLKXKKKKKKAIXRRXQILLTXSIHSFKRLXTSXQN
ALKRTHNSICLAMIQAX
>rep1_1_repE(pAMbeta1)_AF007787_3
EYPFCCRNCASXRLVKVQIXKXXNSLNHYQARXKQRGYFCVSLKIKHDWRSWCCSDFRGS
DSRKSRYIYTLDTQRLSLWNVCRRKPFIHERTFXKQFKTNQYLLYXFXYSHGKRNYFSKR
YFNNRYXFRFYAYYDYQIXXRLSSIFCFRNASLCDFKIRIXICQSSQNNFAKYPRIFWKV
FASXSNVXSFWYCSHTKNGQCRIFXSXLPLFFQRMARLVFQTNRXXGLYSFKSNGFKRYR
RQKTSRXTLVXSLIARNEIFRRKGFNRAXXRHVYPLFSLLXFRLFNRNVRIXYVXVXXSI
RSTLRRKRSNQNCXKCLFRKLSRGXXGIHYHSLQSLGIKXFNQXRFICPSRVVXIQEKKK
RTSTCSFVRMERRFNGLYXRKKRCIQALFSDDQKRDXRSARHSXTDIRXIAEGTEGESGN
FLXDXTRKKWWHSTCXCXIIVAIDHXSKKRRKRKLYKGADKFFXLRAYIHSRDFKQASRT
PXNGHTTRFVXLXYRLX
>rep1_1_repE(pAMbeta1)_AF007787_4
SACIIAKQIELCVRFRAFCXLVXSLLNECMLXVKRICQRLYIAFFFFFFYFNDRXQQXFN
TSKLNATISSWFNLKENFLIRLQYLQQFIXCPFRNAXHFSNLFFGRHXIRLVYIAFFANI
SHXIFFPFXQMNTLTFASFFLEFKPPLTDKXIFTGXITXYPSFAKNGNVFPISPLIVFXI
GTSNNFDYFFFFXGLIXSIIKLKHIIFARFDXIAXTKVGXREGKHDVITPYXTLFSXKFR
FVQXEIKPGFIYLFFAFCTAXNRXTXTSKALIICLFERPILPFFERITVIRIKKFYIVRS
WYASNTKMITRXINWQRLSKIFSDILRNYFGCFDRFKFXFXSHIDWRFXNKICLITFIRF
DNHSRHKTXINSGCXNIACXNSFFCRVNIKINKEGIDLSXIVFRMSFRVXTVFVCIRSIT
INVGCPMCKCILIFLNRFLGSQNNTTTANHAXFXAIRKNSPFAFTWLGSDXANFTIFKFV
LXQAVMKHSFYNKRDIH
>rep1_1_repE(pAMbeta1)_AF007787_5
SLYHSXTNRVVCPFXGVLLACLKSLEXMYALSQKNLSAPLYSFLFLLFLLXXSIATMIXH
XQVECHHFFLVXSXRKFPDSPSVPSAIYLMSVQECLALLXSLFWSSLNKACIHRFFRXYK
PLNLLSILTNEHVDVRFFFSXIXTTLDGQINLYWLNHLIPKLCKEWXCIPYXPLDSFLNR
HFXQFXLLLFLLRVDLIDYXTQTYYIRTFRLNSLNXSRLKRGXTXRYYALLNPFLLKISF
RAIRDXTRVHLLVFCLLYRLKPLDLNEXSPYYLFVXKTNLAILXKNNGNXDQKILHCPFL
VCEQYQNDYTLDQLAKTFQNILGYFAKLFWLLXQIXILILKSHRLAFLKQNMLDNLYQIX
XSXXAXNLNQXRLLKYRLLKXFLLPCEYQNQXRRYXFVLNCFQNVLSCMNGFRLHTFHND
KRWVSNVXMYLDFLESLPRKSEQHHDRQSCLILSDTQKXPLCFYLAWXXLSEFYYFXICT
LTSRHEAQFLQQKGYSX
>rep1_1_repE(pAMbeta1)_AF007787_6
QPVSXLNKSSCVSVLGRSASLFKVSXMNVCSKSKEFVSAFIXLSFSSFFTLMIDSNNDLT
LASXMPPFLPGLILKKISXFAFSTFSNLSNVRSGMPSTSLISFLVVTKXGLYTSLFSLIX
AIKSSFHSDKXTRXRSLLFFLNLNHPXRTNKSLLVKSLDTQALQRMVMYSLLAPXXFSEX
ALLTILITSFSSKGXSNRLLNSNILYSHVSIEXPELKXAKERVNMTLLRPIKPFSPENFV
SCNKRLNQGSSTCFLPSVPLKTVRLERVKPLLSVCLKDQSCHSLKEXRXLGSKNSTLSVL
GMRAIPKXLHVRSTGKDFPKYSRIFCEIILAALTDLNSDFEVTXTGVSKTKYAXXPLSDL
IIIVGIKPKSIAVVKISLAEIVSFAVXISKSIKKVLICLKLFSECPFVYERFSSAYVPXR
XTLGVQCVNVSXFSXIASSEVRTTPRPPIMLDFERYAKIAPLLLPGLVVIERILLFLNLY
FNKPSXSTVSTTKGIFX
>rep2_1_ORF(E.faeciumContig1183)_JDOE_1
MLSEIYSAILKNGLRTYKYRNSTMKPAGHIDSSRSGAIFAYRSKQLMNVGRGMVITSEEA
ILENEKKLTHWTPNTYRFGTYADDYRTVVKGHSEKNLSQINTFVVDIDSKENHQGEIILA
CLDQVGYMPTLILESDHGYQVYFVLKTPGYVTKKSNFKVIDVAKKISKTIRLQLAEKLSG
VDLGCNHFGIARFPQENNIVFKEMNYQYSFADWIQWSMKLESDQKTKEDRERKLIVFPEK
KEIRQVDEPWFDMLLHKANIVGGEGRLGRNNVIFTLSLAYYSSGYALDTCEYNMFTFNER
LQEPLSEAELVKIVRSAYSGNYQAASREFIIELCQQWVSPTLKNNDLFIQRRGWWKFKKP
RDQRKYSHKNEWKEDLLAYLSEKSLASEPYLNLSKKELASQLTMPKRTLDKILNELREEN
KVFYKVTRGRNGGMIIASVKTLFARVIQLSKEKRLDYSTRITEVFGLNESLVEETFRQLS
TPLNPLKEVNLFEVDTGX
>rep2_1_ORF(E.faeciumContig1183)_JDOE_2
CXAKFIQLFLKTAYVHTNIETAPXNLQVILIPVGVVLSLRTVASNXXMLGVVWSLLRKKL
FXRTKRNXRIGHLIPIALVLMRMIIEQWLKVILRKTXVKSTHLXLISIQKRTIKAKLFXP
VXIKWATCQRXFXNQIMVIKFILYXRHQAMSQRKAISRXSMXQKKFQKQFVYSWLKNCPE
WIXDVTTSELLDSHKKIILFLKKXTISILLLTGFNGRXSLNQIKKQKKIENENXLSFLRK
KKFVKXMNRGSICYFIKQTSSAEKDVLVEIMXFSRFLXLITLQVMHWILANTICSHSTNG
YRNRYLKQNXXRLYVVLILVIIKQQAENSLLNCASNGFHQPXKIMICSFNDVAGGNLKSH
EIKENIVIKMNGKKIYWLIXAKKVLLVSLIXTCQKKNWLHNXRCPSEHLIRSXMSYERRI
KSSTRXHEEEMAEXSLLQSKRCSRGLFNXVKKRDXIIQQGSQRYLDSTRAXXKRHLDNYQ
PPXTLLKKXIFLKXIQVX
>rep2_1_ORF(E.faeciumContig1183)_JDOE_3
VERNLFSYSXKRLTYIQISKQHHETCRSYXFQXEWCYLCVPXQAINECWAWYGHYFGRSY
FRERKETNALDTXYLSLWYLCGXLSNSGXRSFXEKLKSNQHICSXYRFKREPSRRNYFSL
FRSSGLHANANFRIRSWLSSLFCTKDTRLCHKEKQFQGDRCSKKNFKNNSSTVGXKIVRS
GSRMXPLRNCSIPTRKXYCFXRNELSVFFCXLDSMVDEAXIRSKNKRRSRTKTNCLSXEK
RNSSSRXTVVRYVTSXSKHRRRRRTSWSKXCDFHAFFSLLLFRLCIGYLRIQYVHIQRTV
TGTAIXSRISKDCTXCLFWXLSSSKQRIHYXIVPAMGFTNLKKXXSVHSTTWLVEIXKAT
RSKKIXSXKXMERRSIGLSKRKKSCXXALFEPVKKRIGFTTNDAQANTXXDLKXVTRGEX
SLLQGNTRKKWRNDHCFSQNVVREGYSTKXRKETRLFNKDHRGIWTQRELSRRDIXTIIN
PLEPSXRSESFXSRYRLX
>rep2_1_ORF(E.faeciumContig1183)_JDOE_4
STCIYFKKIHFFKRVQGGXXLSKCLFYXALVESKYLCDPCXIIXSLFFTXLNNPREQRFD
XSNDHSAISSSCYLVEDFILLSXLIXDLIKCSLGHRXLXSQFFFXQVQIRLTSKTFFAXI
SQXIFFPFIFMTIFSLISWLFKFPPATSLNEQIIIFXGWXNPLLAQFNNEFSACCLIITR
ISTTYNLYXFCFRXRFLXPFVECEHIVFASIQCITXRVISXRKRENHIISTKTSFSADDV
CFMKXHIEPRFIYLTNFFFLRKDNXFSFSIFFCFLIXFKLHRPLNPVSKRILIVHFFKNN
IIFLWESSNSEVVTSXIHSGQFFSQLXTNCFXNFFCYIDHLEIAFLCDIAWCLXYKINLI
TMIXFXNXRWHVAHLIXTGXNNFALMVLFXIDINYKCVDLTXVFLRMTFNHCSIIIRIST
KAIGIRCPMRXFLFVLXNSFFRSNDHTTPNIHXLLATVRKDSTTPTGINMTCRFHGAVSI
FVCTXAVFKNSXINFAQH
>rep2_1_ORF(E.faeciumContig1183)_JDOE_5
NLYLLQKDSLLXEGSRGLIIVXMSLLLSSRXVQIPLXSLLNNLVSFLYLVEXPSRTTFXL
KQXSFRHFFLVLPCRRLYSPLVTHLRSYQVFAWASLVVKPILFLTGSNKAHXQDFFRLDK
PIDLLSIHFYDYIFFDLVAFXISTSHVVEXTDHYFLRLVKPIAGTIQXXILCLLLDNYQN
KHYVQSLLILLQIAVPVTVRXMXTYCIRKYPMHNLKSNKLKKAXKSHYFDQDVLLRRRCL
LYEVTYRTTVHLLDEFLFSQERQLVFVLDLLLFFDLIQASSTIESSQQKNTDSSFLXKQY
YFLVGIEQFRSGYILDPLRTIFQPTVDELFLKFFLLHRSPXNCFSLXHSLVSLVQNKLDN
HDLILKLALACSPLDLNRLKXFRLDGSLLNRYQLQMCXFDLSFSQNDLXPLFDNHPHKYQ
SDRYXVSNALVSFRSLKXLLPKXXPYHAQHSLIACYGTQRXHHSYWNQYDLQVSWCCFDI
CMYVSRFXEXLNKFRSTX
>rep2_1_ORF(E.faeciumContig1183)_JDOE_6
QPVSTSKRFTSLRGFKGVDNCLNVSSTKLSLSPNTSVILVEXSSLFSLLSXITLANNVLT
EAMIIPPFLPRVTLXKTLFSSRNSFKILSSVRLGIVSCEANSFFDRFKXGSLARLFSLRX
ANRSSFHSFLXLYFLXSRGFLNFHQPRRXMNRSLFFKVGETHCWHNSIMNSLLAAXXLPE
XALRTIFTNSASDSGSCNRSLNVNILYSQVSNAXPEEXXAKESVKITLFRPRRPSPPTMF
ALXSNISNHGSSTXRISFFSGKTISFRSRSSFVFXSDSSFIDHXIQSAKEYXXFISLKTI
LFSCGNRAIPKWLHPRSTPDNFSANCRRIVFEIFFATSITLKLLFFVTXPGVFSTKXTXX
PXSDSKISVGMXPTXSKQAKIISPXWFSFESISTTNVLIXLKFFSEXPLTTVRXSSAXVP
KRXVLGVQCVSFFSFSKIASSEVMTIPRPTFINCLLRYAKIAPLLLESIXPAGFMVLFRY
LYVRKPFLRIAEXISLNX
>rep3_1_rep63A(pAW63)_BTH011655_1
MNTVQKAIELILHKGLRKYKSKNSKAGLVSIAHQEKFESKVLNGKKNKKGSIFITRKKED
LSAKFGTRGVVLSSEEAVLDHVGQASHWTPNVYNFGTYGQNGLRTIVGHTEKNLQQINCF
VIDIDSKSFPMTAINDVALNAGFGVPTMILETTKGYQVYYVLDKAVYVSNNKNFIAIKSA
KRISQNLREMFAESLPNVDLTCNHFGFFRMPSVQNVVMFFEENVYTFKELQEWSKRQDDN
KGNEQFHNVIESPFAKNTPVEQPKQMDELWFKQVISCTNVSPKQTKAGRNNAIFTLSLAC
FQSQYAIKDTMDLMDQFNSNLEQPLDHTEVRGIVMSAYSGKYQAAHKDYIERLLQTYGVG
GQASAFRAPSVLWKKHKKQRKDRVRSHWHEWEADIITFLSMNSKNKPVLYFTQSELCEAL
NIPRSTLNTVLKKSTKIHKTVEGKGKTAKTGFSTIGMLIAFALKENGKRRESYLNYLQGL
FPQMGNILGQAKTSNAIEEQETLYSILEGLPAGX
>rep3_1_rep63A(pAW63)_BTH011655_2
XIQYKKLLNXYYIKGYENINLKIRKLDXYLLHIKRNLKAKCXMGRRIKRVQFLLLVRKKI
XALSLGLVAXYYLLKKLYWIMXDRLLTGHLMYIILVHMVKMVFVQLXGIRKRTYNKLTVL
LLILIQSHSLXLRLMMWHXMQVLVYRLXFLKQRRVIKCIMCWIKLCTYQITRTLXLLNQR
NVSLKTXEKCLLRVCQTWIXHAITLGSSECLQFKMLXCSLRKMCIHSRSYRSGASVKTTI
REMNSFIMXXRVLLLKTLLXSNQSKWMNYGSNKXLVVQMYLQNKQRQGETMRFLPFLXRV
SKVNMLLKTQWTXWISLIVTXSNRXITQRLEELLCLHTLESTRQHIKITXSVYYKHTVWV
DKLQLFVHLQYCGRNIRNNVRIVCVVIGMNGKLTLLLSYPXIQKTNLCYTLHNQNCAKRL
TFPAAHXTRFXRRVQKSIKRLREKGKQQKQDFLQSACXLHLHXKKMAKEERAIXTTYKGY
FLKWVIFLDKQKQVTPXKNKRHFTAYXKGYQLVX
>rep3_1_rep63A(pAW63)_BTH011655_3
EYSTKSYXINTTXRVTKIXIXKFESWTSIYCTSREIXKQSVKWEEEXKGFNFYYSXERRF
KRXVWDSWRSIIFXRSCTGSCRTGFSLDTXCIXFWYIWSKWSSYNCRAYGKEPTTNXLFC
YXYXFKVIPYDCDXXCGIKCRFWCTDYDSXNNEGLSSVLCVGXSCVRIKXQELYSYXISE
TYLSKLKRNVCXEFAKRGFNMQSLWVLQNAFSSKCCDVLXGKCVYIQGVTGVEQASRRQX
GKXTVSXCDRESFCXKHSCRATKANGXTMVQTSNXLYKCISKTNKGRAKQCDFYPFFSVF
PKSICYXRHNGLNGSVXXXPRATARSHRGXRNCYVCILWKVPGSTXRLHRAFITNIRCGW
TSFSFSCTFSIVEETXETTXGSCAXSLAXMGSXHYYFLIHEFKKQTCAILYTIRTVRSAX
HSPQHIKHGSKEEYKNPXNGXGKRENSKNRIFYNRHANCICIKRKWQKKRELFKLLTRAI
SSNGXYSWTSKNKXRHRRTRDTLQHIRRATSWLX
>rep3_1_rep63A(pAW63)_BTH011655_4
LTSWXPFXYAVKCLLFFYGVTCFCLSKNITHLRKXPLXVVXIALSSFAIFFXCKCNXHAD
CRKSCFCCFPFSLNRFMDFCTLLXNRVXCAAGNVKRFAQFXLCKVXHRFVFXIHGXESNN
VSFPFMPMTTHTILTLFLMFLPQYXRCTKSXSLSTHTVCLXXTLYVIFMCCLVLSRVCRH
NNSSNLCVIXRLLXVTIKLIHXVHCVFNSILTLETRXRKGKNRIVSPCLCLFWRYICTTN
YLFEPXFIHLLWLLYRSVFSKRTLYHIMKLFISLIVVLTLAPLLXLLECIHIFLKEHHNI
LNXRHSEEPKVIACXIHVWQTLSKHFSXVLRDTFRXFNSYKVLVIXYVHSFIQHIIHLIT
LRCFKNHSRYTKTCIXCHIINRSHREXLXININNKTVNLLXVLFRMPYNCTKTILTICTK
IIYIRCPVRSLSYMIQYSFFRRXYYATSPKLSAXIFFLTSNKNXTLFILLPIXHFAFKFL
LMCNRYXSSFRIFRFIFSXPFMXYXFNSFLYCIH
>rep3_1_rep63A(pAW63)_BTH011655_5
NQLVALLICCKVSLVLLWRYLFLLVQEYYPFEEIALVSSLNSSLFFCHFLLMQMQLACRL
XKILFLLFSLFPQPFYGFLYSSLEPCLMCCGECXALRTVLIVXSIAQVCFLNSWIRKXXC
QLPIHANDYAHDPYVVSYVSSTILKVHEKLKLVHPHRMFVINALCNLYVLPGTFQSMQTX
QFLXPLCDLAVALGYYXTDPLSPLCLXXHIDFGNTLKKGXKSHCFALPLFVLEIHLYNXL
LVXTIVHPFALVALQECFXQKDSLSHYETVHFPYCRLDACSTPVTPXMYTHFPQRTSQHF
ELKAFXRTQSDCMLNPRLANSQQTFLLSFERYVSLIXXLXSSCYLIRTQLYPTHNTLDNP
SLFQESXSVHQNLHLMPHHXSQSXGMTLNQYQXQNSXFVVGSFPYALQLYEDHFDHMYQN
YIHXVSSEKPVLHDPVQLLQKIILRHESQTXRLNLLSYEXXKLNPFYSSSHLTLCFQISL
DVQXILVQLSNFXIYIFVTLYVVLIQXLFVLYSX
>rep3_1_rep63A(pAW63)_BTH011655_6
XPAGSPSNMLXSVSCSSMALLVFACPRILPIXGNSPCKXFKXLSLLLPFSFNANAISMPI
VENPVFAVFPFPSTVLWIFVLFFRTVFNVLRGMLSASHSSDCVKYSTGLFFEFMDKKVIM
SASHSCQXLRTRSLRCFLCFFHNTEGARKAEACPPTPYVCNKRSMXSLCAAWYFPEYADI
TIPLTSVXSSGCSRLLLNXSIKSIVSLIAYXLWKHAKERVKIALFRPAFVCFGDTFVQLI
TCLNHSSSICFGCSTGVFLAKGLSITLXNCSFPLLSSXRLLHSCNSLNVYTFSSKNITTF
XTEGILKNPKXLHVKSTFGKLSANISLKFXEIRFADLIAIKFLLFDTYTALSNTXYTXXP
FVVSRIIVGTPKPAFNATSLIAVIGNDFESISITKQLICCRFFSVCPTIVRRPFXPYVPK
LYTLGVQXEACPTXSSTASSEDNTTPRVPNLALKSSFLRVIKIEPFLFFFPFNTLLSNFS
XCAIDTSPAFEFLDLYFRNPLCSINSIAFCTVFX
>rep3_2_rep165(pBMB165)_DQ242517_1
MNTVQKAINLILHKGIRKYKSKNSKAALVSITKQEKFEDKMLNGKKNKKGSIFITRKKAD
LSAPFGTRGVVLTSEEATLDHVGQASHWTPNVYNFGTYSENGLRTIVGHTEKNLQQINCF
VIDIDSKSFPMKAINDVALNAGFGVPTMILQTTKGYQVYYVLDKAVYVTNKKNYIAIKSA
KRISQNLREMFAESLPQVDLTCNHFGFFRMPSEENIIMFFEENVYSFKELQDWSKRQDDN
KGKEFFAIPGENNVIETPFSKNKPVEQPKQVEEAWFKQVINCTNIAPQQTKAGRNNAIFT
LSLACFQSEVSIKETLDMMDQFNSNLEQPLDHVEVRGIVMSAYSGKYQAAHKDYIDRLLQ
TYATPEQVNSFRSPAAFWRKHKKKREDRVRSHWHEWEADIIAFLSINSKNKPVLYFTQKE
LCEAINIPRSTLNTVLKKSNKIYKTVEGKGKTAKTGFSTIGMLISFALREKGQKRESYLI
YLNELFPQMGNILLQAKNNSAMAEETALYSLIEGLPAGX
>rep3_2_rep165(pBMB165)_DQ242517_2
XIQYRKLLILYFIKGYENINLKTQKLLXYLLQNKRNLKTKCXMVRRIKKDLFLLLVKKLI
XAHLLVQEEXCXHLRKLHWIMLDKLLTGLLMYIILVHIVKMAFVQLLATLKKTYNKLIAL
XLILIQSHSQXKRLMMLRXMLALVCQLXFFKQQRVTRCITCWIKLYMXRIKRTILLLNQQ
KESLKTXEKCLLKAYHKXIXHVITLASSECLQKRILLCSLRKMYILSRSCRIGVRDKMIT
KVKNFSQFQVKITXLKLHFQKTNLXSSQNRXKKRGLSKLSIVRTXRHNKQKQGVIMQFLL
FHXHVSKVKYQLKKHXIXWTSLIATWNSLXIMLRLEGLSCLHIQESTRLLIKITXIVYFK
HMRHLNKLIRLDHQLHFGENIKRNVKIEYVLTGMSGKQILLLSCQLIQKINLCYTLHKKN
YVKLLIFLEVLXILSXKRVIKYIKLLKEKGKLQKQAFQQLACXFPLHYVKKGKKGRVIXS
IXTSCFPKWVISYYKQKTIALWQKKRHYTAXSKGCQLVX
>rep3_2_rep165(pBMB165)_DQ242517_3
EYSTESYXSYTSXRDTKIXIXKLKSCSSIYYKTREIXRQNAEWXEEXKRIYFYYSXKSXF
KRTFWYKRSSVNIXGSYTGSCWTSFSLDSXCIXFWYIXXKWPSYNCWPHXKKPTTNXLLC
NXYXFKVIPNESDXXCCVKCWLWCANYDSSNNKGLPGVLRAGXSCICNEXKELYCYXISK
KNLSKLERNVCXKPTTSRFNMXSLWLLQNAFRREYYYVLXGKCIFFQGVAGLEXETRXXQ
RXRIFRNSRXKXRNXNSIFKKQTCRAAKTGRRSVVXASYQLYEHSATTNKSRAXXCNFYS
FISMFPKXSINXRNTRYDGPVXXQPGTAFRSCXGXRDCHVCIFRKVPGCSXRLHRSSTSN
ICDTXTSXFVXITSCILEKTXKETXRSSTFSLAXVGSRYYCFPVNXFKKXTCAILYTKRT
MXSYXYSXKYSKYCLEKEXXNIXNCXRKRENCKNRLFNNWHVNFLCITXKRAKKGELFNL
FKRAVSPNGXYLTTSKKQXRYGRRNGIIQPNRRAASWLX
>rep3_2_rep165(pBMB165)_DQ242517_4
LTSWQPFDXAVXCRFFCHSAIVFCLXXDITHLGKQLVXIDXITLPFLPFFTXCKGNXHAN
CXKACFCSFPFSFNSFIYFITLFQDSIXSTSRNINSFTXFFLCKVXHRFIFXINXQESNN
ICFPLMPVRTYSIFTFLFMFSPKCSWXSKRINLFRCRICLKXTIYVIFMSSLVLSXICRH
DNPSNLNMIXRLFQVAIKLVHHIXCFFNXYFTLETCXXKSKNCIITPCFCLLWRYVRTID
NLLKPRFFYLFWLLYRFVFXKWSFNYVIFTWNCEKFFTFVIILSLTPILQLLERIYIFLK
EHNNILFXRHSEEAKVITCXIYLWXAFSKHFSQVLRDSFCXFNSNIVLFIRYIYSFIQHV
IHLVTLCCLKNHSWHTKASIXRNIINRFHWEXLXININYKAINLLXVFFSVANNCTKAIF
TICTKIIYIRSPVRSLSNMIQCSFLRCXHYSSCTKRCAXISFFTSNKNRSFFILLTIQHF
VFKFLLFCNRYXSSFXVFRFIFSYPFMKYKINSFLYCIH
>rep3_2_rep165(pBMB165)_DQ242517_5
NQLAALRLGCIMPFLLPXRYCFLLVVRYYPFGETARLNRLNNSPFFALFHVMQRKLTCQL
LKSLFLQFSLFLQQFYIFYYSFSRQYLEYFXEYXXLHIVLFVXSIAQVYFLNXLTGKQXY
LLPTHASENVLDLHVSFYVFSKMQLVIXTNXLVQVSHMFEVDDLCNLYEQPGTFLNMQTX
QSLXPQHDLKAVPGCYXTGPSYLVFLXLILHFGNMLMKEXKLHYYALLLFVVALCSYNXX
LAXTTLLLPVLAALQVCFLKMEFQLRYFHLELRKILYLCYHLVSYSNPATPXKNIHFPQR
TXXYSLLKAFXRSQSDYMLNLLVVGFQQTFLSSFERFFLLIXXQYSSFYSLHIQLYPARN
TPGNPLLFEESXLAHQSQHLTQHHXSLSLGMTLNQYQLQSNXFVVGFFQCGQQLYEGHFH
YMYQNYIHXESSEKLVQHDPVXLPQMLTLLLLYQKVRLNQLFYEXXKXILFYSSYHSAFC
LQISLVLXXILEQLLSFXIYIFVSLYEVXDXXLSVLYSX
>rep3_2_rep165(pBMB165)_DQ242517_6
XPAGSPSIRLYNAVSSAIALLFFACSKILPIWGNSSFKXIKXLSLFCPFSRNAKEINMPI
VEKPVFAVFPFPSTVLYILLLFFKTVFRVLLGILIASHSSFCVKYSTGLFFELIDRKAII
SASHSCQXERTRSSRFFLCFLQNAAGDLNELTCSGVAYVXSRRSMXSLXAAWYFPEYADM
TIPLTSTXSKGCSRLLLNWSIISSVSLIDTSLWKHANERVKIALLRPAFVCCGAMFVQLI
TCLNHASSTCFGCSTGLFFENGVSITLFSPGIAKNSLPLLSSCLLLQSCNSLKEYTFSSK
NIIIFSSEGILKKPKXLHVKSTCGRLSANISLKFXEILFADLIAIXFFLFVTYTALSSTX
YTWXPFVVXRIIVGTPKPAFNATSLIAFIGNDFESISITKQLICCRFFSVWPTIVRRPFS
LYVPKLYTLGVQXEACPTXSSVASSDVNTTPLVPKGALKSAFLRVIKIDPFLFFLPFSIL
SSNFSCFVIDTRAAFEFLDLYFRIPLXSIRLIAFCTVFX
>rep4_1_CDS2(pCRL291.1)_NC002799_1
MAKKQNYIWQNDRNFALDKYEQQQYYYVVESNDLISKAKHDLTTNQLKIIDFLISKIKPD
DKDFEELETSMYELTNVLEIKRSGRTYNQIANTLDDLRKKEVTIYNQERESIVRTGWVSS
AEYFKNGKVILSFDKKLAPYLLDLSKNYSQYLLIDTVKLKSKYAILLYKLMREADRDNGK
SITILQGTPEEFKDWLGAPKNYNYGRLKENVLKKAIEEINLKIDDMNLEILQGRYGRKVV
QVEIHNNWTVQRATKENTEYVESISTHDWLNGDSKX
>rep4_1_CDS2(pCRL291.1)_NC002799_2
WQKNRIIFGKTTVTLLXINTSNNSITMSSSLMTXSQKQNMIXLLINXKSLISLSLKSSQM
IKILKNLKLLCMSXLMFXRLSAVVGPIIKLLIPXMTXEKKKXLSIIKKEKVSFGLGGFLL
LNTLKTVKSYCLLIKNXPLIYXIXARIIRNICLXIRLNSKVSMQSCFINXCVKLIETTGN
QSLFYKEHQKSLKTGXALQKIIIMADXKRMCXKKQLKKLTXKLTIXTXKFYKGGMVARXF
KLKFITIGRYNEQPKKIRNTWKVFQLMIGXMEIQNX
>rep4_1_CDS2(pCRL291.1)_NC002799_3
GKKTELYLAKRPXLCFRXIRATTVLLCRRVXXLNLKSKTXFNYXSTENHXFPYLXNQARX
XRFXRTXNFYVXVDXCFRDXAQWSDLXSNCXYLRXLKKKRSDYLXSRKRKYRSDWVGFFC
XILXKRXSHIVFXXKISPLFTRFKQELFAIFAYRYGXTQKXVCNLALXIDAXSXXRQREI
NHYSTRNTRRVXRLVRRSKKLXLWPIKRECVKKSNXRNXLENXRYELRNFTRAVWSQGSS
SXNSXQLDGTTSNQRKYGIRGKYFNSXLAEWRFKMX
>rep4_1_CDS2(pCRL291.1)_NC002799_4
SFXISIQPIMSXNTFHVFRIFFGCSLYRPIVMNFNLNYLATIPPLXNFXVHIVNFQVNFF
NCFFXHILFXSAIIIIFWSAXPVFKLFWCSLXNSDXFPVVSISFTHQFIKQDCILTFEFN
RIYKQILRIILAXIXXIRGXFFIKRQYDFTVFKVFSRRNPPSPNDTFSFLIIDSHFFFSX
VIXGISNLIIGPTTALNLXNISQLIHRSFKFFKIFIIWLDFRDKEINDFQLISSXIMFCF
XDXVIRLDDIVILLLLVFIXSKVTVVLPNIILFFCH
>rep4_1_CDS2(pCRL291.1)_NC002799_5
ILNLHSANHELKYFPRIPYFLWLLVVPSNCYEFQLELPCDHTALVKFLSSYRQFSSXFLQ
LLFLTHSLLIGHNYNFLERLTSLXTLLVFLVEXXLISRCLYQLHASIYKARLHTYFXVXP
YLXANIANNSCLNLVNKGLIFYQKTIXLYRFXSIQQKKPTQSERYFLFLDYRXSLLFFLS
HLRYXQFDYRSDHCAXSLKHXSTHTXKFQVLQNLYHLAXFXRXGNQXFSVDXXLNHVLLL
RLSHXTRRHSNTVVARIYLKQSYGRFAKYNSVFLPX
>rep4_1_CDS2(pCRL291.1)_NC002799_6
HFESPFSQSXVEILSTYSVFSLVARCTVQLLXISTXTTLRPYRPCKISKFISSIFKLISS
IAFFNTFSFNRPXLXFFGAPNQSLNSSGVPCRIVIDFPLSLSASRINLXSKIAYLLLSLT
VSISKYCEXFLLKSSKXGANFLSKDNMTLPFLKYSAEETHPVRTILSLSXLXIVTSFFLK
SSKVLAIXLXVRPLRLISKTLVNSYIEVSSSSKSLSSGLILEIRKSMIFSXLVVKSCFAF
EIKSLDSTTXXYCCCSYLSKAKLRSFCQIXFCFFAX
>rep4_2_CDS3(pKC5b)_AF378372_1
SANHGXNTFHVFRIFFGCSLYRPIVMNFHLNHFATIPSLXNFXVHIVNFQVNFLDCFYKN
LILQRVVGITFWCSKPFFKFFWCTLXNGNXFPVVPISFTHXFIQQNGIFTFEFNRIYKQI
LRIILAXIXXIRGXFFIKRQYDFTVFKVFSRRHPPSTNDTFSVLIIDSHFFFSXVIXGIS
NLIISPPTTLNLXNISQFIHRGFKFFKIFIIWFDFRDKEINDFQLISSXIMFCLXDXVIR
LNDIVILLLLIFIXSKVTVVFPNEILFLYH
>rep4_2_CDS3(pKC5b)_AF378372_2
QPIMVEILSTYSVFSLVARCTVQLLXISTXTTLRPYRPCKISKFISSIFKLISSIAFIRT
XFFKELXEXLFGAPSHSLNSSGVPCRMVIDFPLSLSASRINLYSKMAYLLLSLTVSISKY
CEXFLLKSSKXGANFLSKDNMTLPFLKYSADDTHPVRTILSLSXLXIVTSFFLKSSKVSA
IXLXVRPLRLISKTLVNSYIEVSSSSKSLSSGLILEIRKSMIFSXLVVKSCFAFEIKSLD
STTXXYCCCSYLSKAKLRSFFQMKFCFCTX
>rep4_2_CDS3(pKC5b)_AF378372_3
SQSWLKYFPRIPYFLWLLVVPSNCYEFPLEPLCDHTVLVKFLSSYRQFSSXFPRLLLXEL
DSSKSCRNNFLVLQAILXILLVYLVEWXLISRCPYQLHALIYTAKWHIYFXVXPYLXANI
ANNSCLNLVNKGLIFYQKTIXLYRFXSIQQTTPTQYERYFLCLDYRXSLLFFLSHLRYQQ
FDYKSAHYAXSLKHXSIHTXRFQVLQNLYHLVXFXRXGNQXFSVDXXLNHVLPLRLSHXT
QRHSNTVVAHIYLKQSYGRFSKXNSVFVPX
>rep4_2_CDS3(pKC5b)_AF378372_4
MVQKQNFIWKNDRNFALDKYEQQQYYYVVESNDLISKAKHDLTTNQLKIIDFLISKIKPD
DKDFEELETSMYELTNVLEIKRSGRTYNQIADTLDDLRKKEVTIYNQDRESIVRTGWVSS
AEYFKNGKVILSFDKKLAPYLLDLSKNYSQYLLIDTVKLKSKYAILLYKLMREADRDNGK
SITILQGTPEEFKEWLGAPKSYSYNSLKNQVLIKAIEEINLKIDDMNLEILQGRYGRKVV
QVEIHNNWTVQRATKENTEYVESISTMIGX
>rep4_2_CDS3(pKC5b)_AF378372_5
GTKTEFHLEKRPXLCFRXIXATTVLLCRXVXXLNLKGKTXFNYXSTENHXFPYLXNQTRX
XRFXRTXNLYVXIDXCFRDXAXWADLXSNCXYLRXLKKKRSDYLXSRQRKYRSYWVGVVC
XILXKRXSHIVFXXKISPLFTRFKQELFAIFAYRYGXTQKXICHFAVXINAXSXXGQREI
NYHSTRYTRRIXRMAWSTKKLFLQLFEESSSYKSNRGNXLENXRYELRNFTRTVWSQSGS
SGNSXQLDGTTSNQRKYGIRGKYFNHDWLX
>rep4_2_CDS3(pKC5b)_AF378372_6
WYKNRISFGKTTVTLLXINMSNNSITMSLSLMTXSQRQNMIXLLINXKSLISLSLKSNQM
IKILKNLKPLCMNXLMFXRLSVVGGLIIKLLIPXMTXEKKKXLSIIKTEKVSFVLGGCRL
LNTLKTVKSYCLLIKNXPLIYXIXARIIRNICLXIRLNSKVNMPFCCINXCVKLIGTTGN
QLPFYKVHQKNLKNGLEHQKVIPTTLXRIKFLXKQSRKLTXKLTIXTXKFYKDGMVAKWF
KWKFITIGRYNEQPKKIRNTWKVFQPXLAX
>rep4_3_ORF(pMBB1)_EFU26268_1
MISMFERKVIMAKKQNYIWRTDRNFALDEYEKQQYYYVVESNDLITKARHDLDARELKIM
DYVVSKIKPDDEDFNIVQTSMYELTNVLNLKRNGRTYSQLAESLESMRAKSVRVYNEVEK
RLTLTGWFEVVDLWENGKIQLKINKQFAPYLLQLKHDYTQHLLIDTVKLKSKYSILLYKL
MREADKDKGKSIAILQGTPEEFKEWLGAPENYDYNRLKENILKKAVEEINLKIDDMDLEI
LQGRYGRKVVQVEIHNNWTVQRATEENSKYVESISTHDWLNGGKX
>rep4_3_ORF(pMBB1)_EFU26268_2
XLVCLKGKLLWLKNKTIFGGPTVILHXMNMKNNSITMSLSLMTXSLKLDMIXTLENXKLW
IMWCQKLNQMMKILILFKHPCMNXLMFXIXRGMDEHIVNXLKALNLXELKAFVYITKLKN
VXRXQVGLKLLTFGKTGKFNXRLTSNSLLIFSNXSMTIRNICXXIQLNLKVNILSCFTNL
XERRIRIKENQSQSYRELLKSLKSGXALQKTMTITDXKKIFXKKQSKKLIXKSTIWTXKF
YKVDTVAKWFKWKFITIGRYNEQRKKIRNTWKAFLLMIGXMEANX
>rep4_3_ORF(pMBB1)_EFU26268_3
DXYVXKESYYGXKTKLYLADRPXFCIRXIXKTTVLLCRXVXXLNHXSXTXFRRXRIKNYG
LCGVKNXTRXXRFXYCSNIHVXINXCFKFKEEWTNIXSISXKPXIYESXKRSCIXRSXKT
FDVNRLVXSCXPLGKRENSIKDXQAIRSLSSPIKAXLYATFVDRYSXTXKXIFYLALQTY
ERGGXGXRKINRNLTGNSXRVXRVVRRSRKLXLXQTERKYFEKSSRRNXSKNRRYGLRNF
TRSIRSQSGSSGNSXQLDGTTSNGRKFEIRGKHFYSXLAEWRQMX
>rep4_3_ORF(pMBB1)_EFU26268_4
SFASIQPIMSRNAFHVFRIFFRCSLYRPIVMNFHLNHFATVSTLXNFXVHIVDFXINFFD
CFFQNIFFQSVIVIVFWSAXPLFKLFRSSLXDCDXFSFILIRLSHKFVKQDRIFTFKFNC
IYQQMLRIVMLXLEKIRSELLVNLXLNFPVFPKVNNFKPTCXRQTFFNFVIYTNAFSSHR
FKAFSXLTICSSIPLXIXNISXFIHGCLNNIKIFIIWFNFXHHIIHNFXFSSVXIMSSFS
DXVIRLNDIVILLFFIFIXCKITVGPPNIVLFFSHNNFPFKHTNH
>rep4_3_ORF(pMBB1)_EFU26268_5
ICLHSANHEXKCFPRISNFLPLLVVPSNCYEFPLEPLCDRIDLVKFLSPYRRFLDXFLRL
LFSKYFLSVCYSHSFLERLTTLXTLQEFPVRLRLIFLYPYPPLSXVCKARXNIYFXVXLY
LSTNVAYSHALIGEDKERIACXSLIEFSRFPKGQQLQTNLLTSNVFQLRYIHERFXLSXI
QGFQLIDYMFVHSSLNLKHXLIHTWMFEQYXNLHHLVXFLTPHNPXFLILXRLNHVXLXX
LSHXTQRHSNTVVFHIHLMQNYGRSAKYSFVFXPXXLSFQTYXSX
>rep4_3_ORF(pMBB1)_EFU26268_6
HLPPFSQSXVEMLSTYFEFSSVARCTVQLLXISTXTTLRPYRPCKISKSISSIFRLISST
AFFKIFSFSLLXSXFSGAPNHSLNSSGVPCKIAIDFPLSLSASLISLXSKIEYLLLSLTV
SINKCCVXSCFNWRRXGANCLLIFNXIFPFSQRSTTSNQPVNVKRFSTSLYTRTLLALID
SRLSANXLYVRPFLFKFKTLVNSYMDVXTILKSSSSGLIFDTTXSIIFNSLASKSCLALV
IKSLDSTTXXYCCFSYSSNAKLRSVRQIXFCFLAIITFLSNILIX
>rep5_1_rep(pMW2)_NC005011_1
MTGETVVYKNEMNLVPLRRFTATEINLFFAMCNKLKEQDTNTLRLSFDELKKLSNYSPET
RNINRFANDLDNVYKKMLNLTIRYEDDDVIERFVLFNHYRIHKREQYLEISTSSNLKHIL
NSITNNFTKFELKEMTRLKSTYSKNMFRLLKQYKHTGYLKIHIDDFKNRLDIPKSYRMTD
INKNVFKPIIIELGSIFNNLTINKIKAKKGRKIEWIEFTFDAEKRIHNKRQPQMSKIDKS
RQYVRREKTPKWLEERSYEKQPQKDYDPQLEKEREDFLKQLELNWEX
>rep5_1_rep(pMW2)_NC005011_2
XQERQLYIKMKXIXFHXGDLQLLKLIYFLRCVINXKSKILIHYVCLLMNXKNXVIIVQKH
VILIDLLMIXIMCIKRCXIXPLDMKMMMXXKDSFYSIIIESISENNIXKYQLLQIXNTYX
IQLLIILQNLNXKKXLGLNLHILKICLDYLNNTNIQAIXKFTSMILKIVXIYLNLIVXLI
LTKMFLNLLLLNXVLYLIILLSIKSKRKKGVKLNGXSSHLTLRNAFITNDNLKCPRXINQ
DNMXGVKRRLNGXKNGHMKSNLKKITTHNXRKNERIFXNNLNXIGNX
>rep5_1_rep(pMW2)_NC005011_3
DRRDSCIXKXNEFSSIKAIYSYXNXFIFCDVXXIKRARYXYITFVFXXIKKIKXLXSRNT
XYXXICXXFRXCVXKDVEFNHXIXRXXCNRKIRFIQSLXNPXARTISRNINFFKFKTHIE
FNYXXFYKIXIKRNDXAXIYIFXKYVXITXTIQTYRLFKNSHRXFXKSFRYTXILSYDXY
XQKCFXTYYYXIRFYIXXSYYQXNQSEKRAXNXMDRVHIXRXETHSXQTTTSNVQDRXIK
TICEAXKDAXMVRRTVIXKATSKRLRPTIRERTRGFFKTTXTELGIX
>rep5_1_rep(pMW2)_NC005011_4
LFPIQFKLFXKILSFFLXLWVVIFLRLLFIXPFFXPFRRLFTPHILSXFIYLGHLRLSFV
MNAFLSVKCELYPFNFTPFFRFDFIDSKIIKYRTXFNNNRFKNIFVNISHTIRFRYIXTI
FKIIDVNFXIACMFVLFKXSKHIFRICRFKPSHFFXFKFCKIISNXIQYVFXIXRSXYFX
ILFSLMDSIMIEXNESFYYIIIFISNGXIQHLFIHIIXIISKSINITCFWTIITXFFXFI
KRQTXCISILLFXFITHRKKXINFSSCKSPXWNXIHFIFIYNCLSCH
>rep5_1_rep(pMW2)_NC005011_5
IPNSVQVVLKNPLVLSLIVGRNLFEVAFHMTVLLTIXASFHASHIVLIYLSWTFEVVVCY
ECVSQRQMXTLSIQFYALFSLXFYXXXDYXIXNLIQXXXVXKHFCXYQSYDKIXVYLNDF
XNHRCEFLNSLYVCIVXVIXTYFXNMXIXAXSFLLIQILXNYXXLNSICVLNLKKLIFLD
IVLAYGFYNDXIKRIFLLHHHLHIXWLNSTSFYTHYLNHXQIYXYYVFLDYNYLIFLIHQ
KTNVMYXYLALLIYYTSQKINXFQXLXIALMELNSFHFYIQLSLLSX
>rep5_1_rep(pMW2)_NC005011_6
YSQFSSSCFKKSSRSFSNCGSXSFXGCFSYDRSSNHLGVFSRLTYCLDLSILDIXGCRLL
XMRFSASNVNSIHSILRPFFALILLIVRLLNIEPNSIIIGLKTFLLISVIRXDLGISKRF
LKSSMXIFKXPVCLYCLSNLNIFLEYVDLSLVISFNSNFVKLLVIEFNMCFKFEEVDISR
YCSRLWILXXLNKTNLSITSSSSYLMVKFNIFLYTLSKSLANLLILRVSGLXLLNFFNSS
KDKRNVLVSCSFNLLHIAKNKLISVAVNRLNGTKFISFLYTTVSPVX
>rep5_2_rep(pN315)_AP003139_1
MQNQYFTVQENYKERFYQIPKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNSWVDEDG
NIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDI
YKIEKEENDVEPYGEKDVRFSNVQKFENRTSRSSKIERPEVRKSNTNDTDFNDIDFNDTE
NNDMNDLNDIKYKNEISNHSNHSNQFTHNFDDKEMLLQEFPEQLTNYLLKYDYRDLEIIK
AVILKAKKSFNSRHEDMHYMLEDIEDEILTSLKRLKKAIHDRGVKGQKETIKSMQAYLMQ
TILTELEETHALYMRRKNMKQYNIFNQX
>rep5_2_rep(pN315)_AP003139_2
CKINILQCKKITKKDFIKSLKYSLPVKIIKIXLMIXKXPMLSYVIAXIYLLKIAGLMKMV
TFTLFIQMKSXWKSXIVKKKSXQKXKKGXKTMVYSFKNDVVXINQIFYIXXNLLSQNVIF
TKXKKKKTMLNLTARRTFDFRTSRSSKIERPEVRKSNVQKFENRTLMILTLMTLTLMILR
IMIXMTXMIXSTKMKLVIIQIIQINLHIILMIKKCYCKNSQNNXLIIYXNMIIEIXKSXR
LLFLKQKNHLIQGMKICITCXRTLRMKYXLLXKDLKKLYMIGELKAKRKQSSQCKLIXCK
QFXLNLKKHMPFICAVKTXNNIISLINX
>rep5_2_rep(pN315)_AP003139_3
AKSIFYSARKLQRKILSNPXSILYQXKLXKSNXXYENSLCYLTXSLKFIYXKXLGXXRWX
HLLCLFKXKANGNLKLXKRKVNKNKKRVRKRWSTHSKTTWFKXTKYSIFNETYCHRTXYL
QNRKRRKRCXTLRREGRSIFERPEVRKSNVQKFENRTSRSSKIEHXXYXLXXHXLXXYXE
XXYEXLEXYKVQKXNXXSFKSFKSIYTXFXXXRNAIARIPRTTNXLFIKIXLXRFRNHKG
CYSXSKKIIXFKAXRYALHVRGHXGXNINFFKKTXKSYTXXGSXRPKGNNQVNASLFNAN
NSNXTXRNTCPLYAPXKHETIXYLXSIX
>rep5_2_rep(pN315)_AP003139_4
LLIKDIILFHVFTAHIKGMCFFKFSXNCLHXISLHXLDCFLLAFNSPIMYSFFKSFXRSX
YFILNVLXHVMHIFMPXIKXFFCFKNNSLYDFXISIIIFXXIISXLFWEFLQXHFFIIKI
MCKLIXMIXMITNFIFVLYIIQVIHIIILSIIKVNVIKVSIISVRFSNFWTFDFRTSGRS
IFELLDVRKSNVLLAVRFNIVFFFFYFVNITFCDNRFHXIXNIWFIXTTSFLNEXTIVFX
PFFYFCXLFFFTIXDFHXLFIXINKVNVTIFINPAIFNRXIXAITXDSIGYFHIISXIFI
IFTGKEYFRDLIKSFFVIFLHCKILILH
>rep5_2_rep(pN315)_AP003139_5
IDXRYYIVSCFYGAYKGHVFLQVQLELFALNKLALTXLFPFGLXLPYHVXLFXVFLKKLI
FHPQCPLTCNAYLHALNXMIFLLXEXQPLXFLNLYNHILINNXLVVLGILAIAFLYHQNY
VXIDLNDLNDYXFHFCTLYHSSHSYHYSQYHXSQCHXSQYHXCSIFELLDVRFSNFWTFD
FRTSGRSKIERPSRRKVQHRFLLFLFCKYHVLXQXVSLNIEYLVYLNHVVFEXVDHRFLT
LFLFLLTFLFYNLRFPLAFHLNKQSKCYHLHQPSYFXXINLSDHVRXHRLFSYHXLDFYN
FHWXRILXGFDKIFLCNFLALXNIDFAX
>rep5_2_rep(pN315)_AP003139_6
YXLKILYCFMFLRRIXRACVSSSSVRIVCIKXACIDLIVSFWPLTPLSCIAFLSLFKEVN
ISSSMSSNMXCISSCLELNDFFALRITAFMISKSLXSYFNKXLVSCSGNSCNSISLSSKL
CVNXFEXFEXLLISFLYFISFKSFISLFSVSLKSMSLKSVSLVFDFRTSGRSIFELLDVR
FSNFWTFENRTSFSPXGSTSFSSFSILXISRSVTIGFIKYRIFGLFKPRRFXMSRPSFSN
PFFIFVNFSFLQFKISISFSFEXTKXMLPSSSTQLFLIDKFKRSRKIAXAIFISLVRFLX
FSLVKNTLGIXXNLSLXFSCTVKYXFCX
>rep5_5_rep(pRJ6)_AF241888.2_1
LFFPIHFKLFXKGFSFFFXLWIIFFLRCFFIRSFCXPFWCFLTTYILAXFTYIWHLGLSL
VVNTILSVKSKLXILDFTTFFSFDFIDIEIIKNKSXFFNYRGXYFLINICHSVRFWNIXP
FSKIFNFNFYIACMFILLKYSEHMFRICRFKVCHFSKFKFSEVTSXXINNMFXIWINANR
YIFVLFINFYFSKKNKLSNNILGFFSVCXRENFIIKLFXILNKQFFIMSIVITXFFXFFK
WYINSQITFIFXFITQGKKXIHFGIIKFSQWNXVHIIFIYYCFSTQINPLQYKKNLYINK
VPIYFIIINH
>rep5_5_rep(pRJ6)_AF241888.2_2
YSSQFISSCFKKASLSFSSCGSYSFXGAFSYVRSANHFGVFSRLIYWRDLPIFGIWGCRL
LXIRFSASKVNSKYSILRPFLALILLILRLLKINPNSLIIGANTFXLIFVILXDFGISSR
SLKSSILIFTXPVCLYCLSILNICLEYVDLRCVISLSSNLVKLLVNELIICSKSGLTPID
TYSFSLXISTLVKRINFLITFSVSSLYVKEKILSXNFSKSXINNFLSXVXXLLNSFNSSN
GILTVKLPLSFNLLHRVKNKFTSVLLNFLNGTKFISFLYTTVSPLKXIHSNIKRTFILIK
FLSILXXXIX
>rep5_5_rep(pRJ6)_AF241888.2_3
ILPNSFQAVLKRLLFLFLVVDHILFEVLFHTFVLLTILVFSHDLYIGVIYLYLAFGVVAC
CEYDSQRQKXTLNTRFYDLFXLXFYXYXDYXKXILILXLXGLILFDXYLSFCKILEYLAV
LXNLQFXFLHSLYVYTAXVFXTYVXNMXIXGVSFLXVQIXXSYXLMNXXYVLNLDXRQXI
HIRSLYKFLLXXKEXTFXXHSRFLLCMLKRKFYHKTFLNLEXTIFYHEYSNYLILLILQM
VYXQSNYLYLLIYYTGXKINSLRYYXIFSMELSSYHFYILLFLHSNKSTPIXKEPLYXXS
SYLFYNNKSX
>rep5_5_rep(pRJ6)_AF241888.2_4
MIYYYKIDRNFINIKVLFILEWIYLSGETVVYKNDMNLVPLRKFNNTEVNLFFTLCNKLK
DKGNLTVNIPFEELKELSNYYTHDKKLFIQDLEKFYDKIFSLTYREETENVIRKFILFTK
VEIYKENEYVSIGVNPDLEHIINSLTSNFTKFELREMTHLKSTYSKHMFRILKQYKHTGY
VKIKIEDFRERLDIPKSYRMTNINQKVLAPIIKELGFIFNNLNINKIKAKKGRKIEYLEF
TFDAENRIHNKRQPQMPNIGKSRQYISREKTPKWLAERTYEKAPQKEYDPQLEKEREAFL
KQLEMNWEEX
>rep5_5_rep(pRJ6)_AF241888.2_5
DLLLXNRXELYXYKGSFYIGVDLFEWRNSSIXKXYELSSIEKIXXYRSEFIFYPVXXIKR
XRXFDCXYTIXRIKRIKXLLYSXXKIVYSRFRKVLXXNFLFNIQRRNRECYXKVYSFYXS
RNLXRERICIYWRXSRFRTYYXFINXXLHXIXTXRNDTPXIYIFXTYVQNTXAVXTYRLC
KNXNXRFXRTARYSKILQNDKYXSKSISPYNXRIRIYFXXSQYQXNQSXKRSXNRVFRVY
FXRXESYSQQATTPNAKYRXITPIYKSXENTKMVSRTNVXKSTSKRIXSTTRKRKRSLFK
TAXNELGRIX
>rep5_5_rep(pRJ6)_AF241888.2_6
XFIIIKXIGTLLIXRFFLYWSGFIXVEKQXYIKMIXTXFHXENLIIPKXIYFLPCVINXK
IKVIXLLIYHLKNXKNXVITILMIKNCLFKIXKSFMIKFSLXHTEKKPRMLLESLFFLLK
XKFIKRTNMYLLALIQIXNILLIHXLVTSLNLNLEKXHTLNLHILNICSEYLSSINIQAM
XKLKLKILENGXIFQNLTEXQILIKKYXPLXLKNXDLFLIISISIKSKLKKVVKSSIXSL
LLTLRIVFTTSDNPKCQIXVNHANIXVVRKHQNGXQNERMKKHLKKNMIHNXKKKEKPFX
NSLKXIGKNX
>rep5_6_rep(pRJ9)_AF447813.1_1
MSGETVVYQNEMNLVPLRKFTSTEIDIFFSLCNKLKEQDIKELTIPFEELRHLSNYYHRS
LKRFVKDLEHVYDKMLSLTYTERSGLSFKKFVLFTGYEVNVDEQELIVSINPKLKHVLNE
ITADFTKFELKEMTHLKSTYSKNMFRLLKQYKHTGYFKIQVDDFRERLDIPKSYRMTHIN
QKVLTPIINELSFIFNNLNINKIKAKKGRKIEWLEFTFDAEKRIHNKRQPQMTNIGKSRQ
YISREKTPKWLEERTYEKIPQREYDPQLEKEREAFLKQLEMNWEEX
>rep5_6_rep(pRJ9)_AF447813.1_2
CLEKLLFIKMKXIXFLYVNLQVQRXIYFLVFVISXKNKTXKNXLYLLKNYVIXVITIIVH
XNDLLKIXSMYTIKCXVXLIQNEVVYLSKNLYYLQVMKLMLTNKNXXLVLTQNXNMFXMK
XQQISLNLNXKKXHILNLHILKTCLDYXNNINIQVILKYKLMTLENVXIFLKVIEXRILI
KKFXLQSLMNXVLFLITLILIKSRQKKDGKSNGXSLLLTLRNAFTTSDNHKXRIXVNQDN
IXVVRKHQNGXKNGHMKKYPKENMIHNXKKKEKLFXNNLKXIGKNX
>rep5_6_rep(pRJ9)_AF447813.1_3
VWRNCCLSKXNEFSSFTXIYKYRDRYIFXSLXXAERTRHKRIDYTFXRITSFKXLLSSFI
KTICXRFRACIRXNVKFNLYRTKWFIFQKICIIYRLXSXCXRTRINSXYXPKIKTCFKXN
NSRFHXIXIKRNDTSXIYIFXKHVXTTKTIXTYRLFXNTSXXLXRTFRYSXKLSNDAYXS
KSFNSNHXXTKFYFXXPXYXXNQGKKRTENRMVRVYFXRXETHSQQATTTNDEYRXIKTI
YKSXENTKMVRRTDIXKNTPKRIXSTTRKRKRSFFKTTXNELGRIX
>rep5_6_rep(pRJ9)_AF447813.1_4
LFFPIHFKLFXKSFSFFFXLWIIFSLGYFFICPFFXPFWCFLTTYILSXFTYIRHLWLSL
VVNAFLSVKSKLXPFDFPSFFCLDFINIKVIKNKTXFINDWSXNFLINMRHSITFRNIXT
FSKVINLYFKITCMFILFXXSKHVFRICRFKMCHFFXFKFSEICCYFIXNMFXFWVNTNY
XFLFVNINFITCKXYKFFERXTTSFCISXTXHFIVYMLXIFNKSFXXTMIVITXMTXFFK
RYSQFFYVLFFQLITKTKKYIYLCTCKFTXRNXIHFILINNSFSRH
>rep5_6_rep(pRJ9)_AF447813.1_5
ILPNSFQVVLKKLLFLFLVVDHILFGVFFHMSVLLTILVFSHDLYIVLIYLYSSFVVVAC
CECVSQRQKXTLTIRFSVLFLPXFYXYXGYXKXNLVHXXLELKLFDXYASFDNFXEYLNV
LXSHQLVFXNNLYVYIVLVVXTCFXNMXIXDVSFLLIQIXXNLLLFHLKHVLILGXYXLL
ILVRQHXLHNLXIIQIFXKINHFVLYKLNLTFYRIHALNLXQIVLMNDDSNYLNDVILQK
VXSILLCLVLSAYYKDXKIYLSLYLXIYVKELNSFHFDKQQFLQTX
>rep5_6_rep(pRJ9)_AF447813.1_6
YSSQFISSCFKKASLSFSSCGSYSLWGIFSYVRSSNHFGVFSRLIYCLDLPIFVICGCRL
LXMRFSASKVNSNHSIFRPFFALILLILRLLKIKLSSLMIGVKTFXLICVIRXLLGISKR
SLKSSTCILKXPVCLYCFSSLNMFLEYVDLRCVISFNSNLVKSAVISFKTCFNFGLILTI
NSCSSTLTSXPVNNTNFLKDKPLRSVXVKLNILSYTCSKSLTNRFNERXXXLLKXRNSSK
GIVNSFMSCSFSLLQRLKNISISVLVNLRKGTKFISFXXTTVSPDX
>rep5_7_rep(pJE1)_AF051916.1_1
MLDIRYTIRTETKIKKFVLFYKYEIDISEKYLEIATSPDLKYILNSITDNFTKFELKEMT
HLKSTYSKNMFRLLKQYKHTGYMKIKIEDFRERLDIPESYRMSNINQFVLTPIIKELSPI
FSNLNINKVKAKKGRKIEWLEFTFDAEKRIHNKRQPQMANIGKSRQYISREKTPKWLEER
TYEKPTQNEYDPQLEKEREAFLKQLQVDWEEX
>rep5_7_rep(pJE1)_AF051916.1_2
CXISDILLELKQKLKNSSYSISMKXIYPKNIXKLLLLLTXNTSXIQLQIILLNSNXKRXH
TLNLPIQKICLDYLNNISIPAIXRLKLKTLENDXIFQNPIECLILINLFXHRLSRSFLQY
LVILISIKXRQKKDVRLSGXSLLLTLRNAFTINDNHKWRIXVSHDNTXVVKKRQNGWKNA
HMKNQHKMSMIRNXKKNEKHFXNNFKLIGKNX
>rep5_7_rep(pJE1)_AF051916.1_3
VRYQIYYXNXNKNXKIRLILXVXNRYIRKIFRNCYFSXLKIHLKFNYRXFYXIRIKRDDT
PXIYLFKKYVXITXTIXAYRLYEDXNXRLXRTTRYSRILXNVXYXSICFNTDYQGAFSNI
XXSXYQXSKGKKRTXDXVVRVYFXRXETHSQXTTTTNGEYRXVTTIHKSXKNAKMVGRTH
IXKTNTKXVXSAIRKRTRSIFKTTSSXLGRIX
>rep5_7_rep(pJE1)_AF051916.1_4
LFFPINLKLFXKCFSFFFXLRIILILCWFFICAFFQPFWRFFTTYVLSXLTYIRHLWLSF
IVNAFLSVKSKLXPLNLTSFFCLYFIDIKITKYWRKLLDNRCXNKLINIRHSIGFWNIXS
FSKVFNFNLHIAGMLILFKXSKHIFXIGRFKVCHLFXFEFSKIICNXIXDVFXVRRSSNF
XIFFGYIYFILIEXDEFFNFCFSSNSISDIXH
>rep5_7_rep(pJE1)_AF051916.1_5
ILPNQLEVVLKMLLVLFLIADHTHFVLVFHMCVLPTILAFFHDLCIVVTYLYSPFVVVVY
CECVSQRQKXTLTTQSYVLFLPLLYXYXDYXILEKAPXXSVLKQIDXYXTFYRILEYLVV
LXSLQFXSSYSRYAYIVXVIXTYFLNRXIXGVSSLLIRIXXNYLXLNLRCILSQEKXQFL
NIFRIYLFHTYRIRRIFXFLFQFXXYIXYLTX
>rep5_7_rep(pJE1)_AF051916.1_6
YSSQSTXSCFKNASRSFSNCGSYSFCVGFSYVRSSNHFGVFSRLMYCRDLPIFAICGCRL
LXMRFSASKVNSNHSILRPFFAFTLLILRLLNIGESSLIIGVKTNXLILDILXDSGISSR
SLKSSILIFIXPVCLYCLSNLNIFFEXVDLRCVISFNSNLVKLSVIEFKMYFKSGEVAIS
KYFSDISISYLXNKTNFLIFVSVLIVYLISNX
>rep6_1_repA(p703_5)_AF109375_1
MSDKSELAVKYQNELNLVPLKNFNAKQMDLFFALCARMKDKGVENIRFSFEELKELSDYK
MTATKAFVADLEKLYKDMLNLSYRTENDDEIEYFVLFNGFKIDKKQKFVEVRVNQDLDYI
INGLTTEFSRFELSAFTSIRSTYAKTLFRLLMQYRSTGYYVVSIEDFRELLDIPEYYQMG
NIDQKVLKPAMKELHNYFENLEVTKIKAKKGNKIAKLEFTFTGLKTNKPSVTMHDWVNGE
X
>rep6_1_repA(p703_5)_AF109375_2
XVINRNXLLNIKMSXILCHLKTLMQNKWICSLRYAHEXKIKEXRIFVSPSRNXRNXVTTK
XLLQKPLXQTXKSCIKICXTFLIVQKTMTKXSILFYSMDLKSTKNKSLLKFELIKIXTIX
XMVXQQSLVGLSCPLLLQYAQHMLKHCFVCXCNIVQQGIMXSVLKTSENCXTYPNIIKWV
TLTKRFXNQQXKNSITILRIXKXQKSKPKKAIRLPNXNLRLLVXKPTNQAXPCTIGXTEN
X
>rep6_1_repA(p703_5)_AF109375_3
EXXIGISCXISKXVKSCATXKLXCKTNGSVLCVMRTNERXRSREYSFLLRGIKGIEXLQN
DCYKSLCSRLRKVVXRYAEPFLSYRKRXRNRVFCFIQWIXNRQKTKVCXSSSXSRFRLYN
KWFNNRVXXVXAVRFYFNTLNICXNIVSFVNAISFNRVLCSQYXRLQRIVRHTRILSNGX
HXPKGFKTSNERTPXLFXEFRSNKNQSQKRQXDCQTRIYVYWSENQQTKRNHARLGKRRI
X
>rep6_1_repA(p703_5)_AF109375_4
LFSVYPIVHGYAWFVGFQTSKRKFXFGNLIAFFGFDFCYFXILKIVMEFFHCWFXNLLVN
VTHLIIFGYVXQFSEVFNTDYIIPCXTILHXQTKQCFSICXAYXSKSGQLKPTKLCCXTI
YYIVXILINSNFNKLLFFVDFKSIEXNKILYFVIVFCTIRKVQHIFIQLFXVCYKGFCSS
HFVVTQFLXFLEGETNILYSFIFHSCAXRKEQIHLFCIKVFKWHKIXLILIFNSXFRFIT
H
>rep6_1_repA(p703_5)_AF109375_5
ILRLPNRAWLRLVCWFSDQXTXILVWQSYCLFWLXFLLLLNSQNSYGVLSLLVLKPFGQC
YPFDNIRVCLTILXSLQYXLHNTLLNDIALTNETMFXHMLSVLKXKRTAQTYXTLLLNHL
LYSLNLDXLELQQTFVFCRFXIHXIKQNTLFRHRFLYDKKGSAYLYTTFLSLLQRLLXQS
FCSHSIPLIPRRRNEYSLLLYLSFVRITQRTDPFVLHXSFXVAQDLTHFDIXQLIPIYHS
X
>rep6_1_repA(p703_5)_AF109375_6
YSPFTQSCMVTLGLLVFRPVNVNSSLAILLPFLALIFVTSKFSKXLWSSFIAGFKTFWSM
LPIXXYSGMSNNSLKSSILTTXYPVERYCINKRNNVLAYVERIEVKADSSNLLNSVVKPF
IIXSKSXLTRTSTNFCFLSILNPLNKTKYSISSSFSVRXERFSISLYNFSKSATKAFVAV
ILXSLNSFNSSKEKRIFSTPLSFIRAHNAKNRSICFALKFLSGTRFNSFXYLTANSDLSL
X
>rep7_1_repC(Cassette)_AB037671_1
MYKNNHANHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLSFDAMTIVGNLNRDNAQ
ALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRIEFNPNKLTRD
EMIWLKQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDKAVKKTIFYGRNGKPETKYFG
VRDSNRFIRIYNKKQERKDNADAEVMSEHLWRVEIELKRDMVDYWNDCFSDLHILQPDWK
TIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLIKEISPVDLTDLMKSTLKANEKQLQ
KQIDFWQHEFKFWKX
>rep7_1_repC(Cassette)_AB037671_2
CIKTIMQIIQIIWKITIXTIFLKPATLIAGWTHILCAYLIQNXVLMQXRSLEISTETTLK
PFLNLXVXSPKXDFGIFFKQSLKLKHFKKKFILNMTKXKQIVGIDVICVLNLIQTNLHEM
KXFGXNKIXXATWKMTVLQDXIXPLILKMIXVTTMQCLIKQLRKLFFMVVMVSQKQNILA
XEIVIDLLEFIIKSKNVKIMQMLKLCLNIYGVXKSNLKEIWWITGMIALVIYISCNQIGK
LSNALRIEQXFLCYXVMKKNGESFTEILEQNIRIXXKKFRQSIXRTXXNRLXKRTKNNCK
NKSIFGNMNLNFGNX
>rep7_1_repC(Cassette)_AB037671_3
VXKQSCKSFKSFGKSRFRQFFXNRLLXXPVGRTYCVHIXSKIKFXCNDDRWKSQPRQRSS
PFXIYECRAPNKTLGYSSNKVXSXSTSRKSLYXIXQSESRXLGXTXYAYXIXSKQTYTRX
NDLVKTKYNKLHGRXRFYKIRFSLXFXRXFEXLLCNVXXSSXENYFLWSXWXARNKIFWR
ERXXXIYXNLXXKARTXRXCRCXSYVXTFMACRNRTXKRYGGLLEXLLXXFTYLATRLEN
YPTHCGXSNSFYVIEXXRRMGKASQKFXNKIXEFDKRNFASRFNGLNEIDFKSERKTIAK
TNRFLATXIXILEIX
>rep7_1_repC(Cassette)_AB037671_4
LFPKFKFMLPKIDLFLQLFFVRFXSRFHXVRXIDWRNFFYQILIFCSRISVKLSPFFFIT
QXHKNYCSIRSALDSFPIWLQDMXITKAIIPVIHHISFKFDFYTPXMFRHNFSICIIFTF
LLFIINSNKSITISHAKIFCFWLTITTIKNSFLNCFIRHCIVVTQIIFKIKGXIXSCKTV
IFHVAYYILFXPNHFISCKFVWIKFNTHITSIPTICFHFVIFNINFFLKCFSFKLCLKNI
PKSYLGLYTHKFRKGLSVVSVEISNDRHCIKTXFWIRYAHSMCVQPAIRVAGFRKIVXIV
IFQMIXMICMIVFIH
>rep7_1_repC(Cassette)_AB037671_5
ISKIXIHVAKNRFVFAIVFRSLLKSISLSPLNRLAKFLLSNSYILFXNFCEAFPILLHHS
ITXKLLLYPQCVGXFSNLVARYVNHXSNHSSNPPYLFXVRFLHAINVQTXLQHLHYLYVL
AFYYKFXXIYYYLSRQNILFLAYHYDHKKXFSXLLYQTLHSSHSNHLQNQRLNLILXNRH
LPCSLLYFVLTKSFHLVXVCLDXIQYAYYVYPNYLLSLCHIQYKLFLEVLXLXTLFEEYP
KVLFGALHSXIXKGLERCLGXDFQRSSLHQNLILDQICTQYVRPTGYXSSRFXKNCLNRD
FPNDLNDLHDCFYTX
>rep7_1_repC(Cassette)_AB037671_6
YFQNLNSCCQKSICFCNCFSFAFKVDFIKSVKSTGEISFIKFLYFVLEFLXSFPHSSSSL
NNIKTIALSAVRWIVFQSGCKICKSLKQSFQXSTISLLSSISTRHKCSDITSASALSLRS
CFLLXILINLLLSLTPKYFVSGLPLRPXKIVFLTALSDIAXXSLKSSSKSKAKSNLVKPS
SSMXLIIFCFNQIISSRVSLFGLNSIRILRLSQLSAFTLSYSIXTFSXSALALNFVXRIS
QSLIWGSTLINLERAXALSRLRFPTIVIASKLNFGSDMHTVCASNRLLEXPVLEKLSKSX
FSKXFEXFAXLFLYX
>rep7_2_CDS2(pC221)_NC002129_1
MSTENHSNYLQNKDLDNFSKTGYSNSRLSGNFFTTPQPELSFDAMTIVGNLNKTNAKKLS
DFMSTEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRVEFNPNKLTHEEML
WLKQNIIDYMEDDGFTRLDLAFDFEDDLSDYYAMTDKAVKKTIFYGRNGKPETKYFGVRD
SDRFIRIYNKKQERKDNADVEVMSEHLWRVEIELKRDMVDYWNDCFDDLHILKPDWTTPE
KVKEQAMVYLLLNEEGTWGKLERHAKYKYKQLIKEISPIDLTELMKSTLKENEKQLQKQI
DFWQREFRFWKX
>rep7_2_CDS2(pC221)_NC002129_2
XVQKIIQITYKIRIXTIFLKPATLIAGXVVIFLPPLNQNXVLMLXQSLGIXTKLTLKSYL
ILXVQSHKXGFGIYYKQSLKLKHFKKRFISNMTKXKQIVGIDVICVLNLIQINSHMKKCF
GXNKILSTTWKMTVLRGXIXLLILKMIXVITTQXLIKQLRKLFFMVVMVSQKQNILVFVT
VIDLLEFIIKNKNVKITPMLKLCLNIYGVXKLNXKEIWLITGMIALMIYTFXNPIGQHQK
KXKNKQWFICYXMKKARGENLKDMLNINTSNXLKKYLQLIXRNXXNRLXKRMKSNCKNRL
IFGNVNLDFGSX
>rep7_2_CDS2(pC221)_NC002129_3
EYRKSFKLLTKXGFRQFFXNRLLXXPVKWXFFYHPSTRIKFXCYDNRWEFEQNXRXKAIX
FYEYRATNKALGYITNKVXSXSTSRKGLYRIXQSKSRXLGXTXYACXIXSKXTHTXRNAL
VKTKYYRLHGRXRFYEVRFSFXFXRXFEXLLRNDXXSSXENYFLWSXWXARNKIFWCSXQ
XXIYXNLXXKTRTXRXRRCXSYVXTFMACRNXIEKRYGXLLEXLLXXFTHFETRLDNTRK
SKRTSNGLFVTEXRRHVGKTXKTCXIXIQAIDXRNISNXFNGINEIDFKREXKAIAKTDX
FLATXIXILEVX
>rep7_2_CDS2(pC221)_NC002129_4
LLPKSKFTLPKINLFLQLLFILFXSRFHXFRXINWRYFFNQLLVFIFSMSFKFSPRAFFI
QXQINHCLFFYFFWCCPIGFQNVXIIKAIIPVINHISFQFNFYTPXMFRHNFNIGVIFTF
LFFIINSNKSITVTNTKIFCFWLTITTIKNSFLNCFISHCVVITQIIFKIKSXIXPRKTV
IFHVVDNILFXPKHFFMCEFIWIKFNTHITSIPTICFYFVIFDINLFLKCFSFKLCLXYI
PKPYLWLCTHKIRXLFSVSFVQIPNDCHSIKTXFWLRGGKKITTXPAIRVAGFRKIVXIL
ILXVIXMIFCTH
>rep7_2_CDS2(pC221)_NC002129_5
TSKIXIHVAKNQSVFAIAFHSLLKSISLIPLNQLEIFLXSIACIYIXHVFQVFPTCLLHS
VTNKPLLVLLLFLVLSNRVSKCVNHQSNHSSNQPYLFSIQFLHAINVQTXLQHRRYLYVL
VFYYKFXXIYHCHEHQNILFLAYHYDHKKXFSXLLYQSLRSNHSNHLQNQKLNLTSXNRH
LPCSRXYFVLTKAFLHVXVYLDXIQHAYYVYPNYLLLLCHIRYKPFLEVLXLXTLFVIYP
KALFVALYSXNQIAFXRXFCSNSQRLSXHQNLILVEGWXKNYHLTGYXSSRFXKNCLNPY
FVSNLNDFLYSX
>rep7_2_CDS2(pC221)_NC002129_6
YFQNLNSRCQKSICFCNCFSFSFKVDFINSVKSIGDISLINCLYLYLACLSSFPHVPSSF
SNKXTIACSFTFSGVVQSGFKMCKSSKQSFQXSTISLFNSISTRHKCSDITSTSALSLRS
CFLLXILINLSLSRTPKYFVSGLPLRPXKIVFLTALSVIAXXSLKSSSKSKAKSNLVKPS
SSMXSIIFCFNQSISSCVSLFGLNSTRILRLSQLSAFTLSYSIXTFSXSALALNFVCNIS
QSLICGSVLIKSDSFLALVLFKFPTIVIASKLNSGXGVVKKLPLNRLLEXPVLEKLSKSL
FCKXFEXFSVLX
>rep7_3_CDS1(pCW7)_J03323_1
MSKNNHANHSNHLENHDLDNFSKTGYSNSRLNRHTMYTPEPKLSFDAMTIVGNLNKNNAH
KLSEFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADTWDRRNMRVEFNPNKLTHE
EMLWLKQNIIDYMEDDGFTRLDLAFDFEYDLSDYYAMTDKSVKKTIFYGRNGKPETKYFG
VRDSDRFIRIYNKKQERKDNADIKIMSEHLWRVEIELKRDMVDYWNDCFNDLHILQPDWK
TIERTSDRAMVFMLLNDEEEWGKLERRTKNKYKKLIKEISLIDLTDLMKSTLKANEKQLQ
KQIDFWQREFRFWKX
>rep7_3_CDS1(pCW7)_J03323_2
XVKIITQIIQIIXKITIXTIFLKPATLIAGXTDILCTPRNQNXVLTLXLLLEILIKIMLT
NYLNLXVSSHKFDFGIYYKLNLKLKLYKKRFISNMTKXKQIRGIDVICVLNLIQINLRMK
KCFGXNKTLSTTWKTMVLQDXIXLLILNMIXVIIMQXLINQLRKLFFMVVTVNQKRNILV
FVTVIDLLEFIIKNRNAKIMQILKLCLNTYGVXKLNXKEIWLIIGTIVLMIYIYYNQIGK
LSNVLLIEQWFLCCXMMKKNGENXKDVLRINIKNXLKKYLXLIXLIXXNRLXKRTKNNCK
SRLIFGNVNLDFGSX
>rep7_3_CDS1(pCW7)_J03323_3
EXKXSRKSFKSFRKSRFRQFFXNRLLXXPVKPTYYVHPGTKIKFXRYDYCWKSXXKXCSQ
TIXIYECRATNSTLGYTTNXIXSXSSTRKGLYRIXQSKSRYVGXTXYACXIXSKXTYAXR
NALVKTKHYRLHGRRWFYKIRFSFXFXIXFKXLLCNDXXISXENYFLWSXRXTRNEIFWC
SXQXXIYXNLXXKTGTQRXCRYXNYVXTLMACRNXIKKRYGXLLERLFXXFTYITTRLEN
YRTYFXXSNGFYVVEXXRRMGKIRKTYXEXIXKINXRNISNXFNXFNEIDFKSERKTIAK
ADXFLATXIXILEVX
>rep7_3_CDS1(pCW7)_J03323_4
LLPKSKFTLPKINLLLQLFFVRFXSRFHXISXINXRYFFNXFFIFILSTSFXFSPFFFII
QQHKNHCSIRSTFDSFPIWLXYMXIIKTIVPIINHISFXFNFYTPXVFRHNFNICIIFAF
LFFIINSNKSITVTNTKIFRFWFTVTTIKNSFLNXFISHCIIITXIIFKIKSXIXSCKTI
VFHVVDNVLFXPKHFFMRKFIWIKFNTHITSIPRICFYFVIFDINLFLXSFSFKFSLXYI
PKSNLWLDTHKFRXFVSIIFIKISNNSHSVKTXFWFRGVHSMSVXPAIRVAGFRKIVXIV
IFXMIXMICVIIFTH
>rep7_3_CDS1(pCW7)_J03323_5
TSKIXIHVAKNQSAFAIVFRSLLKSISLNQLNQLEIFLXLIFYIYSXYVFLIFPILLHHS
TTXKPLLYQKYVRXFSNLVVIYVNHXNNRSNNQPYLFLIQFLHAISVQTXFXYLHYLCVP
VFYYKFXXIYHCHEHQNISFLVYRYDHKKXFSXLIYQSLHNNHLNHIQNQKLNLILXNHR
LPCSRXCFVLTKAFLHAXVYLDXIQHAYYVYPTYLLLLCHIRYKPFLVELXLXIXFVVYP
KVEFVARHSXIQIVCEHYFYXDFQQXSXRQNLILVPGCTXYVGLTGYXSSRFXKNCLNRD
FLNDLNDLRDYFYSX
>rep7_3_CDS1(pCW7)_J03323_6
YFQNLNSRCQKSICFCNCFSFAFKVDFIKSVKSIRDISLINFLYLFLVRLSNFPHSSSSF
NNIKTIALSEVRSIVFQSGCNICKSLKQSFQXSTISLFNSISTRHKCSDIILISALSLRS
CFLLXILINLSLSRTPKYFVSGLPLRPXKIVFLTDLSVIAXXSLKSYSKSKAKSNLVKPS
SSMXSIMFCFNQSISSCVSLFGLNSTRILRLSHVSAFTLSYSIXTFSCRALALNLVCSIS
QSRICGSTLINSDSLXALFLLRFPTIVIASKLNFGSGVYIVCRFNRLLEXPVLEKLSKSX
FSKXFEXFAXLFLLX
>rep7_4_repD(pK214)_NC009751_1
VHSVHPQNPKLSFDAMTIVGNLSRDNAQKLSSFMSIEPQIRLWDILQTKFKAKALQEKVY
IEYDKVKADTWDRRNMRVEFNPNKLTHEEMIWLKQNIIDYMEDDGFTRLDLAFDFEDDLS
DYYAMTDKAVKKTIFYGRNGKPETKYFGVRDSNRFIRIYNKKQERKDNADVEVMSEHLWR
VEIELKRDMVDYWNDCFNDLHILKPDWTSPEKLNEQAMVYMLIHEEGKWGELNKRTKYKY
KKIIKEISPIDLTEIMKLTLRENEKQLQKQIDFWHREFRFWEX
>rep7_4_repD(pK214)_NC009751_2
CILCTHKILNXVLTLXQXLEISVVTTLKSYRHLXVLNLKXDFGIYYKRNLKLKHCKKKFI
SNMTKXKQILGTDVICVLNLIQINLHMKKXFGXNRTSSTTWKMTVLQDXIXLLILKMIXV
ITMQXLIKQLRKLFFTVAMVNQKQSILVXEIAIDLLEFTIKSKNVKTMQMLKLCLNTYGV
XKLNLKEIWWIIGMIVLMIYISXNQIGLRQKNXMNKQWFTCXFMKKANGENXIRELNINI
KKXSKKYLQLIXLKXXNXLYEKTKNNCKSRLIFGIVNLDFGSX
>rep7_4_repD(pK214)_NC009751_3
AFCAPTKSXIKFXRYDNSWKSQSXQRSKAIVIYEYXTSNKTLGYTTNEIXSXSTARKSLY
RIXQSESRYLGQTXYACXIXSKXTYTXRNDLVKTEHHRLHGRXRFYKIRFSFXFXRXFEX
LLCNDXXSSXENYFLRSQWXTRNKVFWCERXQXIYXNLQXKARTXRQCRCXSYVXTLMAC
RNXTXKRYGGLLEXLFXXFTYLETRLDFARKIKXTSNGLHVNSXRRQMGRIEXENXIXIX
KNNQRNISNXFNXNNEIDFTRKRKTIAKADXFLASXIXILGVX
>rep7_4_repD(pK214)_NC009751_4
SLPKSKFTMPKINLLLQLFFVFSXSQFHYFSXINWRYFFDYFFIFIFSSLIQFSPFAFFM
NXHVNHCLFIXFFWRSPIWFQDMXIIKTIIPIIHHISFKFNFYTPXVFRHNFNICIVFTF
LLFIVNSNKSIAISHTKILCFWFTIATVKNSFLNCFISHCIVITQIIFKIKSXIXSCKTV
IFHVVDDVLFXPNHFFMCKFIWIKFNTHITSVPSICFHFVIFDINFFLQCFSFKFRLXYI
PKSYLRFNTHKXRXLLSVVTTEISNYCHSVKTXFRILWVHRMH
>rep7_4_repD(pK214)_NC009751_5
TPKIXIHDAKNQSAFAIVFRFLVKSISLFQLNQLEIFLXLFFYIYIXFSYSILPICLLHE
LTCKPLLVHLIFLAKSNLVSRYVNHXNNHSNNPPYLFXVQFLHAISVQTXLQHLHCLYVL
AFYCKFXXIYCYLSHQNTLFLVYHCDRKKXFSXLLYQSLHSNHSNHLQNQKLNLILXNRH
LPCSRXCSVLTKSFLHVXVYLDXIQHAYYVCPKYLLSLCHIRYKLFLAVLXLXISFVVYP
KVLFEVQYSXMTIAFERCHDXDFQLLSXRQNLIXDFVGAQNAX
>rep7_4_repD(pK214)_NC009751_6
HSQNLNSRCQKSICFCNCFSFSRKVNFIISVKSIGDISLIIFLYLYLVLLFNSPHLPSSX
INMXTIACSFNFSGEVQSGFKICKSLKQSFQXSTISLLSSISTRHKCSDITSTSALSLRS
CFLLXILINLLLSLTPKYFVSGLPLRPXKIVFLTALSVIAXXSLKSSSKSKAKSNLVKPS
SSMXSMMFCFNQIISSCVSLFGLNSTRILRLSQVSAFTLSYSIXTFSCSALALNFVCSIS
QSLIXGSILINDDSFXALSRLRFPTIVIASKLNLGFCGCTECT
>rep7_7_rep(pKH7)_NC002096_1
MSKKEQEIYVNLENVKSSKTGYSNSRLSGQTLGKSQPELSFDAMTIVGNLNKTNAKKLSD
FMSIDPQIRLWDILQTKFKAKALQEKVYIEYDKVKADTWDRRNMRVEFNPNKLTSEEMLW
LKQNIIDYMEDDGFTRLDLAFDFEDDLSDYYAMTDKAVKKTVFYGRNGKPETKYFGVRDS
DRFIRIYNKKQERKDNADVEVMSEHLWRVEVELKRDMVDYWNDCFNDLHILKPEWTTLEK
INEQAMVYTLLHEQSMWGKLSKNTKTKFKKMIREISPIDLTELMKSTLKANEKQLQKQID
FWQREFRFWKX
>rep7_7_rep(pKH7)_NC002096_2
XVKKSKKSMXIXKMLNLLKPDTLIAGXVVKLWENLNPNXVLMRXQSLGIXTKLMLKSYLI
LXVXIHKYDFGIYFKQSLKLKHFKKKFISNMTRXKQILGIDVICVLNLIPINSQVKKCFG
XNKILSTTWKMTVLQDXIXLLILKMIXAITMQXLIKQLRKLFFMVVMASQKQNILAFVIV
IDLLEFIIKNKNVKITQMLKLCLNIYGVXKLNXKEIWLITGMIVLMIYTFXNLSGLLXKK
LMSKLWFILCCMNKVCGESXVRILRLNLKKXLEKYLQLIXRNXXNRLXKRTKNNCKNRLI
FGNVNLGFGSX
>rep7_7_rep(pKH7)_NC002096_3
EXKRARNLCEFRKCXIFXNRILXXPVKWSNFGKISTRIKFXCDDNRWEFEQNXCXKVIXF
YEYRSTNTTLGYTSNKVXSXSTSRKSLYRIXQGKSRYLGXTXYACXIXSQXTHKXRNALV
KTKYYRLHGRXRFYKIRFSFXFXRXFERLLCNDXXSSXENCFLWSXWQARNKIFWRSXXX
XIYXNLXXKTRTXRXRRCXSYVXTSMACRSXIKKRYGXLLEXLFXXFTHFETXVDYFRKN
XXASYGLYFVAXTKYVGKAKXEYXDXIXKNDXRNISNXFNGINEIDFKSERKTIAKTDXF
LATXIXVLEVX
>rep7_7_rep(pKH7)_NC002096_4
LLPKPKFTLPKINLFLQLFFVRFXSRFHXFRXINWRYFSNHFFKFSLSILTXLSPHTLFM
QQSINHSLLINFFXSSPLRFQNVXIIKTIIPVINHISFXFNFYTPXMFRHNFNICVIFTF
LFFIINSNKSITITNAKIFCFWLAITTIKNSFLNCFISHCIVIAQIIFKIKSXIXSCKTV
IFHVVDNILFXPKHFFTCEFIGIKFNTHITSIPSICFYLVIFDINFFLKCFSFKLCLKYI
PKSYLWIYTHKIRXLFSISFVQIPNDCHRIKTXFGLRFSQSLTTXPAIRVSGFRRFNIFX
IHIDFLLFFTH
>rep7_7_rep(pKH7)_NC002096_5
TSKTXIHVAKNQSVFAIVFRSLLKSISLIPLNQLEIFLXSFFXIXSXYSYLAFPTYFVHA
TKYKPXLAHXFFLKXSTQVSKCVNHXNNHSSNQPYLFLIQLLHAIDVQTXLQHLRYLYVL
VFYYKFXXIYHYHERQNILFLACHYDHKKQFSXLLYQSLHSNRSNHLQNQKLNLILXNRH
LPCSRXYFVLTKAFLHLXVYWDXIQHAYYVYPKYLLLPCHIRYKLFLEVLXLXTLFEVYP
KVVFVDLYSXNQITFXHXFCSNSQRLSSHQNLIRVEIFPKFDHLTGYXSIRFXKIXHFLN
SHRFLALFYSX
>rep7_7_rep(pKH7)_NC002096_6
YFQNLNSRCQKSICFCNCFSFAFKVDFINSVKSIGDISLIIFLNLVLVFLLSFPHILCSC
NKVXTIACSLIFSKVVHSGFKMCKSLKQSFQXSTISLFNSTSTRHRCSDITSTSALSLRS
CFLLXILINLSLSRTPKYFVSGLPLRPXKTVFLTALSVIAXXSLKSSSKSKAKSNLVKPS
SSMXSIIFCFNQSISSLVSLLGLNSTRILRLSQVSAFTLSYSIXTFSXSALALNFVXSIS
QSRICGSILIKSDNFLALVLFKFPTIVIASKLNSGXDFPKVXPLNRLLEYPVLEDLTFSK
FTXISCSFLLX
>rep7_8_CDS4(pS194)_NC005564_1
MSKKAEEIQAKQSLEKENSNFSKTGYSNSRLNRHIMYTPEPKLHFDAMTIVGNLNKNNAH
KLSEFMSIAPQIRLWDILQTKFKAKALQEKVYIEYDKVKADAWDRRNMRVEFNPNKLTHE
EMLWLKQNIIDYMEDDGFTRLDLAFDFEDDLSDYYAMTDKSVKKTIFYGRNGKPETKYFG
VRDSDRFIRIYNKKQERKDNADIEVMSEHLWRVEIELKRDMVDYWNDCFNDLHILKPDWS
SLEKVKDQAMIYMLIHEESTWGKLERRTKNKYREMLKSISEIDLTDLMKLTLKENEKQLQ
KQIEFWQREFRFWEX
>rep7_8_CDS4(pS194)_NC005564_2
XVKKQKKFRQNKVWKRKTQIFLKPDTLIAGXTDILCTPPNQNYTLMLXQLLGILIRTMLT
NCLNLXVLRHKLDFGIYYKPNLKLRLYKKKFTSNMIKXKQMRGIDVICVLNLILINLRMK
KCFGXNKTSLTTWKMMVLQDXIWLLILKTIXAIIMRXLINQLRKLFFMVVTVNQKQNILV
FVTVIDLLEFIIKNKNVRIMQTLKLCLNTYGVXKLNXKEIWLIIGTIVLMIYIFXNQIGL
VXKKXKTKQXFICXFMKKVHGVNXKDVQKINTEKCXKVFQKLIXRTXXNXLXKRMKNNCK
SRLNFGSVNLDFGSX
>rep7_8_CDS4(pS194)_NC005564_3
EXKSRRNSGKTKFGKGKLKFFXNRILXXPVKPTYYVHPRTKITLXCYDNCWESXXEQCSQ
TVXIYEYCATNXTLGYITNQIXSXGSTRKSLHRIXXSKSRCVGXTXYACXIXSXXTYAXR
NALVKTKHHXLHGRXWFYKIRFGFXFXRRFERLLCDDXXISXENYFLWSXRXTRNKIFWC
SXQXXIYXNLXXKTRTXGXCRHXSYVXTLMACRNXIKKRYGXLLERLFXXFTYFETRLVX
FRKSKRPSNDLYANSXRKYMGXIRKTYKKXIQRNVKKYFRNXFNGLNEIDFKREXKTIAK
ADXILAAXIXILGVX
>rep7_8_CDS4(pS194)_NC005564_4
SLPKSKFTLPKFNLLLQLFFILFXSQFHXVRXINFXNTFXHFSVFIFCTSFXFTPCTFFM
NXHINHCLVFYFFXTRPIWFQNMXIIKTIVPIINHISFXFNFYTPXVFRHNFNVCIILTF
LFFIINSNKSITVTNTKIFCFWFTVTTIKNSFLNXFISHRIIIAQIVFKIKSQIXSCKTI
IFHVVNDVLFXPKHFFMRKFIRIKFNTHITSIPRICFYFIIFDVNFFLXSLSFKFGLXYI
PKSNLWRNTHKFRQFVSIVLIKIPNNCHSIKVXFWFGGVHNMSVXPAIRVSGFRKIXVFL
FQTLFCLNFFCFFTH
>rep7_8_CDS4(pS194)_NC005564_5
TPKIXIHAAKIQSAFAIVFHSLLKSISLSPLNQFLKYFLTFLCIYFLYVFLIYPMYFLHE
LAYKSLLGLLLFLNXTNLVSKYVNHXNNRSNNQPYLFLIQFLHAISVQTXLQCLHYPYVL
VFYYKFXXIYHCHEHQNILFLVYRYDHKKXFSXLIYQSSHNNRSNRLQNQKPNLILXNHH
LPCSQXCFVLTKAFLHAXVYXDXIQHAYYVYPTHLLLLYHIRCKLFLVEPXLXIWFVIYP
KVXFVAQYSXIQTVCEHCSYXDSQQLSXHQSVILVRGCTXYVGLTGYXSIRFXKNLSFPF
PNFVLPEFLLLFYSX
>rep7_8_CDS4(pS194)_NC005564_6
HSQNLNSRCQNSICFCNCFSFSFKVNFIKSVKSISEILFNISLYLFFVRLSNLPHVLSSX
ISIXIIAWSFTFSKLDQSGFKICKSLKQSFQXSTISLFNSISTRHKCSDITSMSALSLRS
CFLLXILINLSLSRTPKYFVSGLPLRPXKIVFLTDLSVIAXXSLKSSSKSKAKSNLVKPS
SSMXSMMFCFNQSISSCVSLLGLNSTRILRLSHASAFTLSYSMXTFSCRALALNLVCNIS
QSLICGAILINSDSLXALFLLRFPTIVIASKCNFGSGVYIICRFNRLLEYPVLEKFEFSF
SKLCFAXISSAFLLX
>rep7_14_rep(MSSA476)_BX571857.1_1
MSLAIPKLSFDAITIVGNLSMSNAERLSHFMSTNPEVRLWDILQTNFKAKALKEKVYIEY
DKIKATLWNRRSMRVEFNPNKLSHDEVLWLKQNIISYLDDVSFTRLDLAFDFEFDLNDYY
ALSDKSAKKTIFYGRNVKPETKYFGVRNSDRFIRIYNKNKNVKIMQMLKLIQHFYGVWKL
NXNEIWLIVGKIVLMICIFXNRIXKXLKIYKNEQCFIYXLTKKRNGEIXKDVLKINIEIS
XKIXRLLIXQIXXKYLXEEMKTNCKNKSTFGXIX
>rep7_14_rep(MSSA476)_BX571857.1_2
CHXLFQNCLLTLXRLLGILACLTQRDFHILXVLILKFGFGIFYKQTLKLKLLKKKFILNM
TKXKQLFGIDVVCALNLILISFRMMKCFGXNKISSVIWTMLVLRDXIWLLILNLIXMTIM
HCQISRQRKLYFMDVMXNQKQNILVCVIVIGLFGFIIKTRTXRXCRCXNXFNISMACGNX
IKTRYGXLLERLFXXFAYFKTEFKNDXKYTRTSNASFINSRRRGMGKFRKTYXKXIXRXV
EKYSVYXFDRFNENIFKRKXKPIAKTNRLLVELX
>rep7_14_rep(MSSA476)_BX571857.1_3
VTSYSKIVFXRYNDCWESXHVXRRETFTFYEYXSXSSALGYFTNKLXSXSSXRKSLYXIX
QNKSNSLEXTXYARXIXSXXAFAXXSALVKTKYHQLFGRCXFYEIRFGFXFXIXFKXLLC
IVRXVGKENYILWTXCKTRNKIFWCAXXXXVYSDLXXKQERKDNADVEIDSTFLWRVEIE
LKRDMVDCWKDCFDDLHILKPNLKMIENIQERAMLHLLTHEEEEWGNLERRTKNKYRDKL
KNIASIDLTDLMKISLRGNENQLQKQIDFWLNX
>rep7_14_rep(MSSA476)_BX571857.1_4
NSTKSRFVFAIGFHFLLKIFSLNLSNQXTLYFSTYLYIYFXYVFLNFPIPLLRELINEAL
LVLVYFQSFLNSVLKYANHQNNLSNNQPYLVLIQFPHAIEMLNQFQHLHYLYVLVFIINP
NKPITITHTKIFCFWFYITSIKYSFLCRLIXQCIIVIXIKFKIKSQIXSRKTNIVQITDD
ILFXPKHFIMRKLIRIKFNAHTTSIPKSCFYFVIFNINFFFKSFSFKVCLXNIPKPNFRI
STHKMXKSLCVRHAKIPNNRYSVKRQFWNSXXH
>rep7_14_rep(MSSA476)_BX571857.1_5
XFNQKSICFCNWFSFPLKDIFIKSVKSIDAIFFNLSLYLFLVRLSKFPHSSSSXVNKXSI
ARSCIFSIIFKFGFKICKSSKQSFQQSTISRFNSISTRHRNVESISTSALSLRSCFYYKS
EXTYHYYAHQNILFLVLHYVHKIXFSLPTYLTMHNSHLNQIQNQKPNLISXNXHRPNNXX
YFVLTKALHHAKAYXDXIQRAYYVYSKELLLFCHIQYKLFLXELXLXSLFVKYPKAELQD
XYSXNVKVSLRXTCXDSQQSLXRQKTILEXLVTX
>rep7_14_rep(MSSA476)_BX571857.1_6
LIQPKVDLFLQLVFISSXRYFHXICQINRRYIFQLISIFIFSTSFXISPFLFFVSXXMKH
CSFLYIFNHFXIRFXNMQIIKTIFPTINHISFXFNFHTPXKCXINFNICIIFTFLFLLXI
RINLSLLRTPKYFVSGFTLRPXNIVFFADLSDNAXXSFKSNSKSKAKSNLVKLTSSKXLM
IFCFNQSTSSCESLLGLNSTRILRLFQRVAFILSYSIXTFSLRALALKFVCKISQSRTSG
LVLIKCESLSALDMLRFPTIVIASKDNFGIASDX
>rep7b_1_repJ(pC223)_NC_005243.1_1
MSKNNYTNHSNHLENHDSDNFSKTGYSNSRLDAHFVCTSNPKLSFDAMTIVGNLNKNSAK
KLSDFMSLDPQIRLWDILQTKFKAKALQEKVYIEYDKVKADTWDRRNMRVEFNPNKLTHD
EMLWLKHNIIDYMEDDGFTRLDLAFDFEDDLSDYYALSEKALKRTVFFGTTGKAETKYFG
SRDSNRFIRIYNKKKERKENADVDVSAEHLWRVEIELKRDMVDYWNNCFNDLHILKPAWA
TLESLKEQAMVYLLLHEESKWGELHRNSRRKYKQIIQEISSIDLTDLMKSTLKDNEENLQ
KQINFWQRKFEFWKX
>rep7b_1_repJ(pC223)_NC_005243.1_2
XVKIIIQIIQITXKITIQTIFLKPATLIAGXTHISCALLIRNXALTLXRXSETLIKTALK
SYPILXVXIHKLDFGIYFKQNLKLKHYKKKFILNMTKXKQILGIDVTXELSLIPTNLHMM
RCYGXNIISLIIWKMMVLQDXIXLLILKMIXAIIMHCQKKLXSELYFSEQLVRQKQNILA
HVIVIDLLEFIIRKKNVKKMQMLMXVLNIYGVLKLNLNEIWXIIGIIVLMTYTFXNLHGL
LWKVXKNKQWFIYYFMKKANGENYIEILVANINKXYKKYLQLIXLIXXNLLXRITKKICK
SRLIFGNENLNFGSX
>rep7b_1_repJ(pC223)_NC_005243.1_3
EXKXLYKSFKSLRKSRFRQFFXNRLLXXPVRRTFRVHFXSEIELXRYDDSRKPXXKQRXK
AIRFYEFRSTNXTLGYTSNKIXSXSTTRKSLYXIXQSKSRYLGXTXHESXVXSQQTYTXX
DVMVKTXYHXLYGRXWFYKIRFSFXFXRXFKRLLCIVRKSFKANCIFRNNWXGRNKIFWL
TXXXXIYXNLXXEKRTXRKCRCXCKCXTSMACXNXTXTRYGRLLEXLFXXLTHFETCMGY
FGKFKRTSNGLFITSXRKQMGRITXKFSSQIXTNNTRNIFNXFNXFNEIYFEGXRRKFAK
ADXFLATKIXILEVX
>rep7b_1_repJ(pC223)_NC_005243.1_4
LLPKFKFSLPKINLLLQIFFVILQSRFHXISXINXRYFLYYLFIFATRISMXFSPFAFFM
KXXINHCLFFXTFQSSPCRFQNVXVIKTIIPIIYHISFKFNFNTPXMFSTYINICIFFTF
FFLIINSNKSITITXAKIFCFCLTSCSEKYSSLXSFFXQCIIIAXIIFKIKSXIXSCKTI
IFHIINDIMFXPXHLIMCKFVGIKLNSHVTSIPSICFYFVIFNINFFLXCFSFKFCLKYI
PKSNLWIXTHKIGXLFSAVFIKVSDYRHSVKAQFRIRSAHEMCVXPAIRVAGFRKIVXIV
IFXVIXMICIIIFTH
>rep7b_1_repJ(pC223)_NC_005243.1_5
TSKIQIFVAKNXSAFANFLRYPSKXISLNQLNQLKIFLVLFVYICDENFYVILPICFLHE
VINKPLLVLLNFPKXPMQVSKCVSHXNNYSNNLPYLVXVQFQHAIDVQHLHQHLHFLYVL
FSYYKFXXIYYYHVSQNILFLPYQLFRKIQFALKLFLTMHNNRLNHLQNQKLNLILXNHH
LPYNQXYYVLTITSHHVXVCWDXTQLSCYVYPKYLLLLCHIQYKLFLVVLXLXILFEVYP
KVXFVDLNSXNRIAFXRCFYXGFRLSSXRQSSISDXKCTRNVRLTGYXSSRFXKNCLNRD
FLSDLNDLYNYFYSX
>rep7b_1_repJ(pC223)_NC_005243.1_6
YFQNSNFRCQKLICFCKFSSLSFKVDFIKSVKSIEDISCIICLYLRREFLCNSPHLLSSX
SNKXTIACSFKLSKVAHAGFKMCKSLKQLFQXSTISRLSSISTRHRCSALTSTSAFSLRS
FFLLXILINLLLSREPKYFVSALPVVPKNTVRFKAFSDNAXXSLKSSSKSKAKSNLVKPS
SSIXSMILCFNHNISSCVSLLGLNSTLMLRLSQVSAFTLSYSIXTFSCSALALNFVXSIS
QSLICGSKLIKSDSFLALFLLRFPTIVIASKLNFGLEVHTKCASNRLLEXPVLEKLSESX
FSKXFEXFVXLFLLX
>rep7b_2_pVGA_NC_011605.1_1
MSENIQENHSKQGTSGEVTNYTRTGYSNSRLDAHFLCTSHPKLSFDGMTIVGNLNKNNAE
RLSKFMSIEPQIRMWDILQTKFKAKALQEKVYIEYDKVKADSWDRRNMRVEFNPNKLSHD
EMVWLKRNIINLMEDDGFTRLDLAFDFEDDLSDYYAMSDKALKKTVFYGIDGKPETKYFG
VRDSERFIRIYNKKKERKDNADIEIDSEHLWRVEIELKRNMVDYWNNCFDDLHILKPAWA
TLESVREQAMVYLLLHEESAWGELHRNSRRKYKQLLQEISPIDLTNLMKLALKENEKQLQ
KQIDFWLSDFRFX
>rep7b_2_pVGA_NC_011605.1_2
CLKIFKKIIQNKAHQGKLQITPEPATLIAGXTHISCALLIQNXVLTGXLLLETLIKTTQN
DFQSSXVLNLKLECGIFCKLNLKLKHYKKKFILSMTKXKRIVGIDVTCVLNLIRTNFHMT
KWFGXNAIXXILWKMTVLQDXIWLLILKMIXVTIMQCQIKLXRKLYFTELTESQKLNILV
YVIVNGLLEFTTRKRNVRIMQIXKXILNIYGVXKLNXNVTWLITGIIALMICIFXNQHGL
LXKVXENKQWCIYYFTRKVLGENYIETPVANTNNYFKKYLQLIXRTXXNWLXKKTKNNCK
SRLIFGFLIFGFX
>rep7b_2_pVGA_NC_011605.1_3
VXKYSRKSFKTRHIRGSYKLHQNRLLXXPVRRTFLVHFSSKIKFXRDDYCWKPXXKQRRT
TFKVHEYXTSNXNVGYFANXIXSXSITRKSLYXVXQSESGXLGXTXHACXIXSEQTFTXR
NGLVKTQYNKSYGRXRFYKIRFGFXFXRXFKXLLCNVRXSFKENCILRNXRKARNXIFWC
TXXXTVYXNLQQEKGTXGXCRYRNRFXTFMACRNXIKTXHGXLLEXLLXXFAYFKTSMGY
FRKCKRTSNGVFITSRGKCLGRITXKLPSQIQTTTSRNISNXFNELNEIGFERKRKTIAK
ADXFLAFXFSVLX
>rep7b_2_pVGA_NC_011605.1_4
SKPKIRKPKINLLLQLFFVFFQSQFHXVRXINWRYFLKXLFVFATGVSMXFSPSTFLVKX
XIHHCLFSYTFXSSPCWFXNMQIIKAIIPVINHVTFXFNFYTPXMFRIYFYICIILTFLF
LVVNSNKPFTITYTKIFSFWLSVNSVKYSFLXSFIXHCIIVTXIIFKIKSQIXSCKTVIF
HKIYYIAFXPNHFVMXKFVRIKFNTHVTSIPTIRFHFVILNINFFLXCFSFKFSLQNIPH
SNLRFNTHELXKSFCVVFIKVSNNSHPVKTXFWMRSAQEMCVXPAIRVAGSGVICNFPXC
ALFXMIFLNIFRH
>rep7b_2_pVGA_NC_011605.1_5
KTENQKAKNQSAFAIVFRFLSKPISLSSLNQLEIFLEVVVCICDGSFYVILPKHFPREVI
NTPLLVLLHFLKXPMLVLKYANHQSNYSSNQPCYVLIQFLHAINVQNLFLYLHYPYVPFS
CCKFXXTVHYHVHQNIXFLAFRQFRKIQFSLKLYLTLHNSHLNHLQNQKPNLILXNRHLP
XDLLYCVLTKPFRHVKVCSDXIQHACYVYPNYPLSLCHTQYKLFLVMLXLXIXFAKYPTF
XFEVQYSXTLKVVLRCFYXGFQQXSSRQNLILDEKCTRNVRLTGYXSSRFWCNLXLPLMC
LVLNDFLEYFQTX
>rep7b_2_pVGA_NC_011605.1_6
QNRKSESQKSICFCNCFSFSFKANFIKFVKSIGDISXSSCLYLRREFLCNSPQALSSXSN
KYTIACSLTLSKVAHAGFKICKSSKQLFQXSTMLRFNSISTRHKCSESISISALSLRSFF
LLXILINRSLSRTPKYLVSGFPSIPXNTVFFKALSDIAXXSLKSSSKSKAKSNLVKPSSS
IRFIILRFNQTISSCESLFGLNSTRMLRLSQLSAFTLSYSIXTFSCNALALNLVCKISHI
LIXGSILMNFESRSALFLLRFPTIVIPSKLNFGXEVHKKCASNRLLEXPVLVXFVTSPDV
PCFEXFSXIFSDX
>rep8_1_EP002*(pAM373)_NC002630_1
MRNTIMSNFTFIKSERAYEAKFFQFPQILLYGDNYKHLSDSAKLGYMVLRDRLDYSLKNN
WIDEENNVYFIFTNKELKTLFNWSNDKLNKVKKDLEKAGLLYQKNMGFDPVKRKNIPNRL
YLADLEVTAKDVYLKTTESLDISGNPKIGHRTISAESLDISGNPKIGHRTISAESLDISG
NPKIGHNLYNTITIDTYKDTVIDTTKEELQHRELLEFFSETQDQTFLDKRCLELIALFSN
TIQEAHNAVGIIIRAKNKQEKKYGRVLIAEDWQEEIETTLRKVYHKIKTDAKIKNVDNYM
FGAFCTTFENCLLQLQSWEQKNDSQTVVTLHDWLEGNDX
>rep8_1_EP002*(pAM373)_NC002630_2
XGILLCLILLLLNLKELMKQSFFSSRKFFYTEIITNTXVIVQNXGIWFYEIDWTTPXRTT
GLMKKTMFILFLLIRNXKLYSIGLMTNXTKXKKIXRKLGYFTKKIWGLILXNEKIFLIDC
TXQIXKLQQKMYILKQLNPLIXAGIRKSDTVPYQLNPLIXAGIRKSDTVPYQLNPLIXAG
IRKSDTIYTILLLXTHIKIQXXIRQKKNYNIVNYWNFSQKPKTRLFXINAVXSXLLYLVT
RFKKHTMLLALLFGQRTNKKKNMAEYXLQKIGKKKLKPPYARSTIKLKQMLKLRMLIITC
LGLSVQLLRIVCYNYSRGNKKMILKRLXHYMIGXKAMTX
>rep8_1_EP002*(pAM373)_NC002630_3
EEYYYVXFYFYXIXKSLXSKVFSVPANSFIRRXLQTLKXXCKIRVYGFTRSIGLLLKEQL
DXXRKQCLFYFYXXGIKNSIQLVXXQTKQSKKRFRESWVTLPKKYGVXSCKTKKYSXXTV
LSRFRSYSKRCISXNNXIPXYKRESENRTPYHISXIPXYKRESENRTPYHISXIPXYKRE
SENRTQSIQYYYYRHIXRYSNRYDKRRITTSXIIGIFLRNPRPDFFRXTLFRVNCFIXXH
DSRSTQCCWHYYSGKEQTRKKIWPSINCRRLARRNXNHLTQGLPXNXNRCXNXECXXLHV
WGFLYNFXELFVTITVVGTKKXFSNGCNITXLVRRQXLX
>rep8_1_EP002*(pAM373)_NC002630_4
LVIAFXPIMXCYNRLRIIFLFPRLXLXQTILKSCTESPKHVIINILNFSICFNFMVDLAX
GGFNFFLPIFCNXYSAIFFFLFVLCPNNNANSIVCFLNRVTKXSNXLXTAFIXKSLVLGF
XEKFQXFTMLXFFFCRIYYCIFICVYSNSIVXIVSDFRIPAYIKGFSXYGTVSDFRIPAY
IKGFSXYGTVSDFRIPAYIKGFSCFKIYIFCCNFXICXVQSIRNIFSFYRIKPHIFLVKX
PSFLXIFFYFVXFVIRPIEXSFXFLISKNKINIVFFINPVVLXGVVQSISXNHIPXFCTI
TXVFVIISVXKNLRELKKLCFISSFRFNKSKIRHNSIPH
>rep8_1_EP002*(pAM373)_NC002630_5
SHCLLTNHVMLQPFENHFFVPTTVIVTNNSQKLYRKPQTCNYQHSXFXHLFXFYGRPCVR
WFQFLLANLLQLILGHIFFLVCSLPEXXCQQHCVLLESCYXIKQLTLNSVYLKKSGLGFL
RKIPIIHDVVILLLSYLLLYLYMCLXXXYCIDCVRFSDSRLYQGIQLIWYGVRFSDSRLY
QGIQLIWYGVRFSDSRLYQGIQLFXDIHLLLXLLNLLSTVYXEYFFVLQDQTPYFFGKVT
QLSLNLFLLCLVCHXTNXIEFLIPYXXKXNKHCFLHQSSCSLRSSPIDLVKPYTLILHYH
LSVCNYLRIKEFAGTEKTLLHKLFQIXXKXNXTXXYSSX
>rep8_1_EP002*(pAM373)_NC002630_6
XSLPSNQSCNVTTVXESFFCSHDCNCNKQFSKVVQKAPNMXLSTFLILASVLILWXTLRK
VVSISSCQSSAINTRPYFFSCLFFARIIMPTALCASXIVLLNKAINSKQRLSKKVWSWVS
EKNSNNSRCCNSSFVVSITVSLYVSIVIVLYRLCPIFGFPLISRDSADMVRCPIFGFPLI
SRDSADMVRCPIFGFPLISRDSVVLRYTSFAVTSKSAKYSLLGIFFRFTGSNPIFFWXSN
PAFSKSFFTLFSLSLDQLNRVFNSLLVKIKXTLFSSSIQLFFKEXSNRSRKTIYPNFALS
LKCLXLSPYKRICGNXKNFASXALSDLIKVKLDIIVFLX
>rep8_2_repA(pEJ97-1)_AJ49170_1
MSESKFYKSKQVYGETFFQLPKVLFTNKKYKKMSSDAKIAYALLKDRFTYSIKNNWIDNE
DNLYFIFTNEELMTLLDVGNQKVVKVKKELEKVELLLQKRMGLNKPNRLYLLRPEVEATD
VYLQSIAENVDNSGNVKITLPKIVDNSGNVKITLPESETNTPLKSLDNTGNVKITHNLYK
ELTTDTYKDTVVDTTKEELQQRELLQSFSETQDHTFLDKRCLDLIALFSNTIQEAHNAVG
IIIRAKNKQEKKYGRVLIAEDWQEEIETTLRKVYHKIKTDAKIKNVDNYMFGAFCTTFEN
CLIQLQSWEQKNESQTVVTLHDWVEKKX
>rep8_2_repA(pEJ97-1)_AJ49170_2
CLNLNFTNLNRFMEKLFFSCQKSYLRIKNTKKXAVMLKXRMLYLKIVLLIQXRIIGLTTK
IIYILFLQMKNXXPYXMLEIKKLLKXKKSLKKXNCYYKKEWGXINQIDYICYVQKLKQLT
YIYNQLLKTLITAEMXKSHFRKSLITAEMXKSXFQNQKQILPXNPLIILEMXKSHTIYIK
NXLQTHIKIQXXIRQKKNYSSVNYYNLSLKPKTILFXINVVXTXLPYLVTRFKKHTMLSV
LLFGQRINKKKNMDEYXLQKIGKKKLKPPYARSTIKLKQMLKLRMLIITCLGLSVQLLKI
VXYNYSRGNKKMSLKRLXHYMIGXKKNX
>rep8_2_repA(pEJ97-1)_AJ49170_3
VXIXILQIXTGLWRNFFSVAKSPIYEXKIQKNEQXCXNSVCFTXRSFYLFNKEXLDXQRR
XFIFYFYKXRIDDLIRCWKSKSCXSKKRAXKSRIATTKKNGVEXTKXIIFVTSRSXSNXR
IFTINCXKRXXQRKCENHTSENRXXQRKCENHXSRIRNKYSLEIPXXYWKCENHTQSIXR
TNYRHIXRYSSRYDKRRITAAXIITIFLXNPRPYFFRXTLFRLNCLIXXHDSRSTQCCRY
YYSGKEXTRKKIWTSINCRRLARRNXNHLTQGLPXNXNRCXNXECXXLHVWGFLYNFXKL
SNTITVVGTKKXVSNGCNITXLGRKKIX
>rep8_2_repA(pEJ97-1)_AJ49170_4