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alistairewj · Jul 14, 2017 · 3d8e6db · 3d8e6db
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diff --git a/notebooks/.DS_Store b/notebooks/.DS_Store
diff --git a/notebooks/mp-mort-pred-comparison.ipynb b/notebooks/mp-mort-pred-comparison.ipynb
diff --git a/notebooks/mp_utils.py b/notebooks/mp_utils.py
diff --git a/queries/.DS_Store b/queries/.DS_Store
diff --git a/queries/dm_braindeath.sql b/queries/dm_braindeath.sql
@@ -0,0 +1,17 @@
+drop table if exists dm_braindeath cascade;
+create table dm_braindeath as
+select
+  ne.hadm_id
+  , max(case when lower(ne.text) like '%brain death%' then 1
+      when lower(ne.text) like '%comatose%' then 1
+      when lower(ne.text) like '%brain dead%' then 1
+      -- typo is direct from hug thesis.. not sure if intentional
+      when lower(ne.text) like '%brain steam dead%' then 1
+      -- adding stem as well just in case
+      when lower(ne.text) like '%brain stem dead%' then 1
+      when lower(ne.text) like '%brain stem death%' then 1
+    else 0 end) as brain_death
+from noteevents ne
+where ne.category = 'Discharge summary'
+group by ne.hadm_id
+order by ne.hadm_id;